* installing *source* package 'markovchain' ... ** this is package 'markovchain' version '0.10.2' ** using staged installation ** libs using C++ compiler: 'g++.exe (GCC) 14.2.0' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from RcppExports.cpp:4: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c classesAndMethods.cpp -o classesAndMethods.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from classesAndMethods.cpp:2: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ctmcClassesAndMethods.cpp -o ctmcClassesAndMethods.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ctmcFittingFunctions.cpp -o ctmcFittingFunctions.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ctmcProbabilistic.cpp -o ctmcProbabilistic.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from ctmcProbabilistic.cpp:1: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fitHigherOrder.cpp -o fitHigherOrder.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from fitHigherOrder.cpp:2: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fittingFunctions.cpp -o fittingFunctions.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadilloExtensions/fixprob.h:24, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadilloExtensions/sample.h:30, from fittingFunctions.cpp:8: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c multinomCI.cpp -o multinomCI.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from multinomCI.cpp:3: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c probabilistic.cpp -o probabilistic.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from probabilistic.cpp:3: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include' -I'D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o In file included from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/RcppArmadillo.h:32, from utils.cpp:2: D:/RCompile/CRANincoming/R-devel/lib/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -shared -s -static-libgcc -o markovchain.dll tmp.def RcppExports.o classesAndMethods.o ctmcClassesAndMethods.o ctmcFittingFunctions.o ctmcProbabilistic.o fitHigherOrder.o fittingFunctions.o multinomCI.o probabilistic.o utils.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-markovchain/00new/markovchain/libs/x64 ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'sort' in package 'markovchain' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (markovchain)