Package check result: OK Changes to worse in reverse depends: Package: parameters Check: tests New result: ERROR Running ‘testthat.R’ [122s/73s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(parameters) > library(testthat) > > test_check("parameters") Starting 2 test processes [ FAIL 1 | WARN 0 | SKIP 120 | PASS 680 ] ══ Skipped tests (120) ═════════════════════════════════════════════════════════ • On CRAN (111): 'test-GLMMadaptive.R:1:1', 'test-averaging.R:1:1', 'test-backticks.R:1:1', 'test-bootstrap_emmeans.R:1:1', 'test-bootstrap_parameters.R:1:1', 'test-brms.R:1:1', 'test-compare_parameters.R:91:7', 'test-compare_parameters.R:95:5', 'test-complete_separation.R:14:5', 'test-complete_separation.R:24:5', 'test-complete_separation.R:35:5', 'test-coxph.R:79:5', 'test-efa.R:1:1', 'test-emmGrid-df_colname.R:1:1', 'test-equivalence_test.R:10:3', 'test-equivalence_test.R:18:3', 'test-equivalence_test.R:82:3', 'test-format_model_parameters2.R:2:3', 'test-gam.R:30:1', 'test-get_scores.R:1:1', 'test-glmer.R:1:1', 'test-glmmTMB-2.R:1:1', 'test-glmmTMB-profile_CI.R:2:3', 'test-glmmTMB.R:8:1', 'test-group_level_total.R:2:1', 'test-helper.R:1:1', 'test-ivreg.R:54:3', 'test-include_reference.R:15:3', 'test-include_reference.R:67:3', 'test-include_reference.R:119:3', 'test-lmerTest.R:1:1', 'test-mipo.R:19:3', 'test-mipo.R:33:3', 'test-mmrm.R:1:1', 'test-model_parameters.anova.R:1:1', 'test-model_parameters.aov.R:1:1', 'test-model_parameters.aov_es_ci.R:158:3', 'test-model_parameters.aov_es_ci.R:269:3', 'test-model_parameters.aov_es_ci.R:319:3', 'test-model_parameters.aov_es_ci.R:372:3', 'test-model_parameters.bracl.R:5:1', 'test-model_parameters.cgam.R:1:1', 'test-model_parameters.coxme.R:1:1', 'test-marginaleffects.R:131:3', 'test-marginaleffects.R:154:3', 'test-marginaleffects.R:173:3', 'test-model_parameters.epi2x2.R:1:1', 'test-model_parameters.fixest_multi.R:3:1', 'test-model_parameters.fixest.R:2:3', 'test-model_parameters.fixest.R:77:3', 'test-model_parameters.fixest.R:147:5', 'test-model_parameters.glmgee.R:1:1', 'test-model_parameters.glm.R:40:3', 'test-model_parameters.glm.R:76:3', 'test-model_parameters.logistf.R:1:1', 'test-model_parameters.logitr.R:1:1', 'test-model_parameters.mclogit.R:5:1', 'test-model_parameters.mediate.R:32:3', 'test-model_parameters.mixed.R:2:1', 'test-model_parameters.nnet.R:5:1', 'test-model_parameters.vgam.R:3:1', 'test-model_parameters_df.R:1:1', 'test-model_parameters_ordinal.R:1:1', 'test-model_parameters_random_pars.R:1:1', 'test-model_parameters_std.R:1:1', 'test-model_parameters_std_mixed.R:3:1', 'test-n_factors.R:10:3', 'test-n_factors.R:26:3', 'test-n_factors.R:76:3', 'test-p_adjust.R:1:1', 'test-p_direction.R:1:1', 'test-p_significance.R:1:1', 'test-p_value.R:14:1', 'test-panelr.R:1:1', 'test-pipe.R:1:1', 'test-pca.R:66:3', 'test-polr.R:2:1', 'test-plm.R:111:3', 'test-posterior.R:2:1', 'test-pretty_names.R:65:5', 'test-print_AER_labels.R:11:5', 'test-printing-stan.R:2:1', 'test-printing.R:1:1', 'test-pool_parameters.R:11:3', 'test-pool_parameters.R:32:1', 'test-quantreg.R:1:1', 'test-random_effects_ci.R:4:1', 'test-robust.R:2:1', 'test-rstanarm.R:3:1', 'test-printing2.R:15:7', 'test-printing2.R:22:7', 'test-printing2.R:27:7', 'test-printing2.R:32:7', 'test-printing2.R:37:7', 'test-printing2.R:49:7', 'test-printing2.R:91:7', 'test-printing2.R:127:7', 'test-serp.R:16:5', 'test-svylme.R:1:1', 'test-visualisation_recipe.R:7:3', 'test-weightit.R:23:3', 'test-weightit.R:43:3', 'test-wrs2.R:58:3', 'test-standardize_parameters.R:31:3', 'test-standardize_parameters.R:36:3', 'test-standardize_parameters.R:61:3', 'test-standardize_parameters.R:173:3', 'test-standardize_parameters.R:298:3', 'test-standardize_parameters.R:332:3', 'test-standardize_parameters.R:425:3', 'test-standardize_parameters.R:515:3' • On Linux (5): 'test-model_parameters.BFBayesFactor.R:1:1', 'test-nestedLogit.R:78:3', 'test-random_effects_ci-glmmTMB.R:3:1', 'test-simulate_model.R:1:1', 'test-simulate_parameters.R:1:1' • TODO: fix this test (1): 'test-model_parameters.lqmm.R:40:3' • TODO: this one actually is not correct. (1): 'test-model_parameters_robust.R:127:3' • empty test (2): 'test-wrs2.R:69:1', 'test-wrs2.R:81:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-marginaleffects.R:52:3'): predictions() ────────────────────── Names of `out` ('Predicted', 'Species', 'SE', 'CI', 'CI_low', 'CI_high', 'S', 'Statistic', 'df', 'p') don't match 'Predicted', 'Species', 'SE', 'CI', 'CI_low', 'CI_high', 'S', 'Statistic', 'p' [ FAIL 1 | WARN 0 | SKIP 120 | PASS 680 ] Deleting unused snapshots: • equivalence_test/equivalence-test-1.svg • equivalence_test/equivalence-test-2.svg • equivalence_test/equivalence-test-3.svg • equivalence_test/equivalence-test-4.svg • equivalence_test/equivalence-test-5.svg Error: Test failures Execution halted Package: VizTest Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘viztest_intro.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/CRAN_recheck/VizTest.Rcheck/vign_test/VizTest/vignettes/viztest_intro_files/figure-html/reg-plot-both-1.png 672x336 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 11890 bytes Input file size = 12760 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10747 zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 10706 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 10706 Output IDAT size = 10706 bytes (1184 bytes decrease) Output file size = 10784 bytes (1976 bytes = 15.49% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/VizTest.Rcheck/vign_test/VizTest/vignettes/viztest_intro_files/figure-html/mltlvl-obj-plot-1.png 480x336 pixels, 8 bits/pixel, 235 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4788 bytes Input file size = 5583 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4145 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4145 Output IDAT size = 4145 bytes (643 bytes decrease) Output file size = 4223 bytes (1360 bytes = 24.36% decrease) ** Processing: /home/hornik/tmp/CRAN_recheck/VizTest.Rcheck/vign_test/VizTest/vignettes/viztest_intro_files/figure-html/avt-preds-plot-1.png 480x336 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 8321 bytes Input file size = 9191 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7376 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7376 Output IDAT size = 7376 bytes (945 bytes decrease) Output file size = 7454 bytes (1737 bytes = 18.90% decrease) Quitting from viztest_intro.Rmd:343-348 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! Package `mvtnorm` required for this function to work. Please install it by running `install.packages("mvtnorm")`. --- Backtrace: ▆ 1. ├─... %>% inferences(method = "simulation", R = 2500) 2. └─marginaleffects::inferences(., method = "simulation", R = 2500) 3. └─marginaleffects:::inferences_simulation(...) 4. └─insight::check_if_installed("mvtnorm") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'viztest_intro.Rmd' failed with diagnostics: Package `mvtnorm` required for this function to work. Please install it by running `install.packages("mvtnorm")`. --- failed re-building ‘viztest_intro.Rmd’ SUMMARY: processing the following file failed: ‘viztest_intro.Rmd’ Error: Vignette re-building failed. Execution halted