* installing *source* package ‘lotri’ ... ** using staged installation ** libs using C compiler: ‘Debian clang version 18.1.8 (11)’ using C++ compiler: ‘Debian clang version 18.1.8 (11)’ clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c asLotriMat.c -o asLotriMat.o clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c lotriBounds.c -o lotriBounds.o clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c lotriLstToMat.c -o lotriLstToMat.o clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c lotriNest.c -o lotriNest.o clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c lotriProp.c -o lotriProp.o clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -c matlist.c -o matlist.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c nearPD.cpp -o nearPD.o In file included from nearPD.cpp:4: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo.hpp:28: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo/r_messages.hpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11.hpp:3: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ In file included from nearPD.cpp:4: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo.hpp:28: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo/r_messages.hpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11.hpp:3: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11/R.hpp:12:9: warning: 'STRICT_R_HEADERS' macro redefined [-Wmacro-redefined] 12 | #define STRICT_R_HEADERS | ^ :4:9: note: previous definition is here 4 | #define STRICT_R_HEADERS 1 | ^ 2 warnings generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c rcm.cpp -o rcm.o In file included from rcm.cpp:1: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo.hpp:28: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo/r_messages.hpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11.hpp:3: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11/R.hpp:11:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 11 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ In file included from rcm.cpp:1: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo.hpp:28: In file included from /srv/hornik/tmp/CRAN_pretest/Library/cpp11armadillo/include/armadillo/r_messages.hpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11.hpp:3: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cpp11/include/cpp11/R.hpp:12:9: warning: 'STRICT_R_HEADERS' macro redefined [-Wmacro-redefined] 12 | #define STRICT_R_HEADERS | ^ :4:9: note: previous definition is here 4 | #define STRICT_R_HEADERS 1 | ^ 2 warnings generated. clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o lotri.so asLotriMat.o lotriBounds.o lotriLstToMat.o lotriNest.o lotriProp.o matlist.o nearPD.o rcm.o -llapack -L/home/hornik/tmp/R-d-clang-18/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-18/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/lotri.Rcheck/00LOCK-lotri/00new/lotri/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lotri)