library("testthat") library("lme4") source(system.file("testdata/lme-tst-funs.R", package="lme4", mustWork=TRUE)) ##-> gSim(), a general simulation function ... set.seed(101) dBc <- gSim(family=binomial(link="cloglog"), nbinom = 1) # {0,1} Binomial ## m1 <- glmer(cbind(incidence, size - incidence) ~ period + (1 | herd), ## family = binomial, data = cbpp) context("Errors and warnings from glmer") test_that("glmer", { expect_error(glmer(y ~ 1 + (1|block), data=dBc, family=binomial(link="cloglog")), "Response is constant") expect_error(glmer(cbind(incidence, size - incidence) ~ period + (1 | herd), family = binomial, data = cbpp, REML=TRUE), "unused argument.*REML") expect_warning(glmer(Reaction ~ Days + (Days|Subject), sleepstudy), "calling glmer.*family=gaussian.*deprecated") expect_warning(glmer(Reaction ~ Days + (Days|Subject), sleepstudy, family=gaussian), "calling glmer.*family=gaussian.*deprecated") m3 <- suppressWarnings(glmer(Reaction ~ Days + (Days|Subject), sleepstudy)) m4 <- lmer(Reaction ~ Days + (Days|Subject), sleepstudy) m5 <- suppressWarnings(glmer(Reaction ~ Days + (Days|Subject), sleepstudy, family=gaussian)) expect_equal(fixef(m3),fixef(m5)) m3@call[[1]] <- m5@call[[1]] <- quote(lmer) ## hack call expect_equal(m3,m4) expect_equal(m3,m5) })