downloading reverse dependencies ... downloading henna_0.3.4.tar.gz ... ok downloading aramappings_0.1.2.tar.gz ... ok installing dependencies ‘abdiv’, ‘ascentTraining’, ‘clarabel’, ‘datasetsICR’, ‘ggeasy’, ‘glpkAPI’, ‘liver’, ‘mltools’ begin installing package ‘mltools’ begin installing package ‘abdiv’ begin installing package ‘ggeasy’ begin installing package ‘liver’ begin installing package ‘clarabel’ begin installing package ‘glpkAPI’ begin installing package ‘ascentTraining’ begin installing package ‘datasetsICR’ * installing *source* package ‘datasetsICR’ ... ** this is package ‘datasetsICR’ version ‘1.0’ ** package ‘datasetsICR’ successfully unpacked and MD5 sums checked ** using staged installation ** data ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datasetsICR) * installing *source* package ‘abdiv’ ... ** this is package ‘abdiv’ version ‘0.2.0’ ** package ‘abdiv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abdiv) * installing *source* package ‘liver’ ... ** this is package ‘liver’ version ‘1.26’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (liver) * installing *source* package ‘ascentTraining’ ... ** this is package ‘ascentTraining’ version ‘1.0.0’ ** package ‘ascentTraining’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ascentTraining) * installing *source* package ‘ggeasy’ ... ** this is package ‘ggeasy’ version ‘0.1.6’ ** package ‘ggeasy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggeasy) * installing *source* package ‘mltools’ ... ** this is package ‘mltools’ version ‘0.3.5’ ** package ‘mltools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mltools) * installing *source* package ‘glpkAPI’ ... ** this is package ‘glpkAPI’ version ‘1.3.4.1’ ** package ‘glpkAPI’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-15 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-15 accepts -g... yes checking for gcc-15 option to enable C11 features... none needed checking how to run the C preprocessor... gcc-15 -E checking for prefix by checking for glpsol... no configure: No prefix given, trying /usr and /usr/local checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for glpk.h... yes checking for library containing glp_create_prob... none required checking for glp_print_ranges... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-7) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsacsCp/R.INSTALL11de364642f5f4/glpkAPI/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkAPI.c -o glpkAPI.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkCallback.c -o glpkCallback.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o glpkAPI.so glpkAPI.o glpkCallback.o init.o -L/usr/local/lib -L/usr/lib -L/usr/lib64 -lglpk -lgmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsacsCp/R.INSTALL11de364642f5f4/glpkAPI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-glpkAPI/00new/glpkAPI/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glpkAPI) * installing *source* package ‘clarabel’ ... ** this is package ‘clarabel’ version ‘0.11.1’ ** package ‘clarabel’ successfully unpacked and MD5 sums checked ** using staged installation Using cargo 1.90.0 (840b83a10 2025-07-30) (built from a source tarball) Using rustc 1.90.0 (1159e78c4 2025-09-14) (built from a source tarball) ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-7) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o # In some environments, ~/.cargo/bin might not be included in PATH, so we need # to set it here to ensure cargo can be invoked. It is appended to PATH and # therefore is only used if cargo is absent from the user's PATH. export PATH="/usr/local/bin:/usr/bin:/bin:/home/hornik/.cargo/bin" && \ echo "Rust version:" `rustc --version` && \ echo "Cargo version:" `cargo --version` && \ if [ "" != "wasm32-unknown-emscripten" ]; then \ if [ "yes" = "yes" ]; then \ mkdir -p /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/.cargo; \ cp ./rust/cargo_vendor_config.toml /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/.cargo/config.toml; \ /usr/bin/tar --extract --xz -f ./rust/vendor.tar.xz -C ./rust ; \ export CARGO_HOME=/home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/.cargo; \ export R_HOME=/home/hornik/tmp/R; \ export PATH="/usr/local/bin:/usr/bin:/bin:/home/hornik/.cargo/bin"; \ export RUSTFLAGS="-C linker=gcc-15"; \ cargo build -j 2 --lib --manifest-path=./rust/Cargo.toml --target-dir /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target --release --offline; \ else \ cargo build -j 2 --lib --manifest-path=./rust/Cargo.toml --target-dir /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target; \ fi \ else \ export CC="gcc-15" && \ export R_HOME="/home/hornik/tmp/R" && \ export CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " && \ export LDFLAGS="-Wl,-O1" && \ export CARGO_PROFILE_DEV_PANIC="abort" && \ export CARGO_PROFILE_RELEASE_PANIC="abort" && \ cargo +nightly build -j 2 --lib --manifest-path=./rust/Cargo.toml --target-dir /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target -Zbuild-std=panic_abort,std; \ fi Rust version: rustc 1.90.0 (1159e78c4 2025-09-14) (built from a source tarball) Cargo version: cargo 1.90.0 (840b83a10 2025-07-30) (built from a source tarball) Compiling proc-macro2 v1.0.101 Compiling unicode-ident v1.0.19 Compiling syn v1.0.109 Compiling autocfg v1.5.0 Compiling num-traits v0.2.19 Compiling quote v1.0.40 Compiling syn v2.0.106 Compiling strsim v0.10.0 Compiling fnv v1.0.7 Compiling ident_case v1.0.1 Compiling libc v0.2.176 Compiling darling_core v0.14.4 Compiling serde_core v1.0.226 Compiling darling_macro v0.14.4 Compiling memchr v2.7.5 Compiling r-src v0.2.2 (https://github.com/bnaras/r-src?rev=03e133e1947cf96829f28bd3ebbd906391523dc2#03e133e1) Compiling darling v0.14.4 Compiling shlex v1.3.0 Compiling find-msvc-tools v0.1.2 Compiling serde v1.0.226 Compiling cc v1.2.38 Compiling derive_builder_core v0.11.2 Compiling num-complex v0.4.6 Compiling serde_derive v1.0.226 Compiling thiserror v1.0.69 Compiling rustversion v1.0.22 Compiling serde_json v1.0.145 Compiling derive_builder_macro v0.11.2 Compiling savvy v0.8.13 Compiling aho-corasick v1.1.3 Compiling blas-sys v0.7.1 Compiling lapack-sys v0.14.0 Compiling thiserror-impl v1.0.69 Compiling savvy-bindgen v0.8.13 Compiling itoa v1.0.15 Compiling ryu v1.0.20 Compiling equivalent v1.0.2 Compiling regex-syntax v0.8.6 Compiling clarabel v0.11.1 Compiling once_cell v1.21.3 Compiling either v1.15.0 Compiling hashbrown v0.16.0 Compiling indexmap v2.11.4 Compiling regex-automata v0.4.10 Compiling itertools v0.11.0 Compiling enum_dispatch v0.3.13 Compiling savvy-macro v0.8.13 Compiling lapack v0.19.0 Compiling blas v0.22.0 Compiling serde-big-array v0.5.1 Compiling derive_builder v0.11.2 Compiling blas-src v0.11.1 Compiling lapack-src v0.11.0 Compiling amd v0.2.2 Compiling savvy-ffi v0.8.13 Compiling cfg-if v1.0.3 Compiling lazy_static v1.5.0 Compiling regex v1.11.2 Compiling clarabel v0.11.1 (/home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust) Finished `release` profile [optimized] target(s) in 1m 00s rm -Rf /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/.cargo rm -Rf ./rust/vendor rm -Rf /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target/release/build gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o clarabel.so init.o -L/home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target/release -lclarabel -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR rm -f /home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src/rust/target/release/libclarabel.a make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpu2v3e1/R.INSTALL11de343f65028c/clarabel/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-clarabel/00new/clarabel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clarabel) checking liver_1.26.tar.gz ... checking henna_0.3.4.tar.gz ... checking aramappings_0.1.2.tar.gz ... Depends: Package: liver Depends: R (>= 3.5.0) Imports: class, ggplot2 Timings: user system elapsed liver 42.129 5.107 50.725 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 0 2 Check results summary: liver ... NOTE * checking CRAN incoming feasibility ... [6s/9s] NOTE rdepends_aramappings ... OK rdepends_henna ... OK