* installing *source* package ‘lit’ ...
** using staged installation
** libs
using C compiler: ‘Debian clang version 16.0.6 (10)’
using C++ compiler: ‘Debian clang version 16.0.6 (10)’
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
22 warnings generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c cauchy.cpp -o cauchy.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c crossprod.cpp -o crossprod.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c gamut.cpp -o gamut.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c hsic_cpp.cpp -o hsic_cpp.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c linreg.cpp -o linreg.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c lit_cpp.cpp -o lit_cpp.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c marginal.cpp -o marginal.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c qfc_CompQuadFormPackage.cpp -o qfc_CompQuadFormPackage.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c read_bed.cpp -o read_bed.o
clang-16  -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c svd.cpp -o svd.o
clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lit.so RcppExports.o cauchy.o crossprod.o gamut.o hsic_cpp.o linreg.o lit_cpp.o marginal.o qfc_CompQuadFormPackage.o read_bed.o registerDynamicSymbol.o svd.o -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/lit.Rcheck/00LOCK-lit/00new/lit/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘lit’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object ‘/srv/hornik/tmp/CRAN/lit.Rcheck/00LOCK-lit/00new/lit/libs/lit.so’:
  /srv/hornik/tmp/CRAN/lit.Rcheck/00LOCK-lit/00new/lit/libs/lit.so: undefined symbol: dgelsd_
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/srv/hornik/tmp/CRAN/lit.Rcheck/lit’