* installing *source* package ‘lefko3’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 16.0.6 (3)’
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c DataManagement.cpp -o DataManagement.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c ErrorChecks.cpp -o ErrorChecks.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c ExtraFunctions.cpp -o ExtraFunctions.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c Mats2.cpp -o Mats2.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c MatsNProj.cpp -o MatsNProj.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c ModelSelection.cpp -o ModelSelection.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c PopChar.cpp -o PopChar.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c PopDyn2.cpp -o PopDyn2.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include/ -fpic  -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lefko3.so DataManagement.o ErrorChecks.o ExtraFunctions.o Mats2.o MatsNProj.o ModelSelection.o PopChar.o PopDyn2.o RcppExports.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/12 -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/lefko3.Rcheck/00LOCK-lefko3/00new/lefko3/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.5.4.1
Current Matrix version is 1.6.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.5.4.1
Current Matrix version is 1.6.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.5.4.1
Current Matrix version is 1.6.0
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** testing if installed package keeps a record of temporary installation path
* DONE (lefko3)