* using log directory ‘/srv/hornik/tmp/CRAN_pretest/lbstproj.Rcheck’
* using R Under development (unstable) (2026-03-16 r89642)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 21.1.8 (3+b1)
    Debian flang version 21.1.8 (3+b1)
* running under: Debian GNU/Linux forky/sid
* using session charset: UTF-8
* current time: 2026-03-17 13:27:11 UTC
* checking for file ‘lbstproj/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘lbstproj’ version ‘0.1.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Alexandre Bohyn <alexandre.bohyn@kuleuven.be>’

New submission

Possibly misspelled words in DESCRIPTION:
  Biostat (4:11)
  pre (13:5)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘lbstproj’ can be installed ... [2s/2s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [3s/3s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [1s/1s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [7s/7s] ERROR
  Running ‘testthat.R’ [7s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(lbstproj)
  > 
  > test_check("lbstproj")
  i Created directory 'R/analysis'.
  v Fig-Test file created at 'R/figures/fig-test.R'.
  v Tab-Test file created at 'R/tables/tab-test.R'.
  Enter project information:
  i Default values are shown in [brackets]. Press [Enter] to accept the default.
  v Setting active project to
    "/tmp/RtmpoRSjOE/working_dir/RtmpHnrDrW/lbstproj-create-a59e82022538f/test-project".
  v Writing 'test-project.Rproj'.
  v Adding ".Rproj.user" to '.gitignore'.
  v Creating project structure
  v Writing 'DESCRIPTION'
  v Writing 'table_of_tables.xlsx' to 'data/tot'
  v Project setup complete! Start working!
  v Setting active project to
    "/tmp/RtmpoRSjOE/working_dir/RtmpHnrDrW/lbstproj-create-a59e82022538f/test-project".
  Enter project information:
  i Default values are shown in [brackets]. Press [Enter] to accept the default.
  v Setting active project to
    "/tmp/RtmpoRSjOE/working_dir/RtmpHnrDrW/lbstproj-create-a59e82d501305/test-project".
  Enter project information:
  i Default values are shown in [brackets]. Press [Enter] to accept the default.
  v Setting active project to
    "/tmp/RtmpoRSjOE/working_dir/RtmpHnrDrW/lbstproj-create-a59e8127dc9e8/test-project".
  Enter project information:
  i Default values are shown in [brackets]. Press [Enter] to accept the default.
  v Setting active project to
    "/tmp/RtmpoRSjOE/working_dir/RtmpHnrDrW/lbstproj-create-a59e840a56005/test-project".
  Author's name [Jane Doe]: 
  Author's email address [jane.doe@email.com]: 
  ! Found 2 files in 'R/figures' but not in the ToT: fig-a.R and fig-b.R
  
  i Found 1 file.
  i Sourcing file 1/1: dat1
  v Sourced file 1/1: dat1 [14ms]
  
  ! 1 script failed and was skipped:
  ! 1 script failed and was skipped:
  i Use `archive_report()` to archive the rendered report in 'results/reports/'
  i Created directory 'data/tables'.
  i Created directory 'data/tables'.
  i Created directory 'data/tables'.
  i Created directory 'data/tables'.
  i Created directory 'results/tables'.
  i Created directory 'results/figures'.
  i Created directory 'results/figures'.
  i Created directory 'results/figures'.
  i Created directory 'results/figures'.
  [ FAIL 1 | WARN 0 | SKIP 4 | PASS 181 ]
  
  ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
  • On CRAN (4): 'test-create_chunk.R:106:1', 'test-create_from_tot.R:64:1',
    'test-create_report.R:156:1', 'test-run_report.R:126:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-create_chunk.R:155:3'): create_chunk() copies the chunk to the clipboard in interactive mode ──
  Error in `local_mocked_bindings(writeClipboard = function(x) {     clipboard <<- x     invisible(x) }, .package = "utils")`: Can't find binding for `writeClipboard`
  Backtrace:
      ▆
   1. └─testthat::local_mocked_bindings(...) at test-create_chunk.R:155:3
   2.   └─cli::cli_abort("Can't find binding for {.arg {missing}}")
   3.     └─rlang::abort(...)
  
  [ FAIL 1 | WARN 0 | SKIP 4 | PASS 181 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [11s/11s] OK
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 1 NOTE