downloading reverse dependencies ... downloading broom.helpers_1.21.0.tar.gz ... ok downloading bulkreadr_1.2.1.tar.gz ... ok downloading cesR_0.1.0.tar.gz ... ok downloading codebook_0.9.6.tar.gz ... ok downloading crosswalkr_0.3.0.tar.gz ... ok downloading datadictionary_1.0.1.tar.gz ... ok downloading dataset_0.4.0.tar.gz ... ok downloading dataviewR_0.1.1.tar.gz ... ok downloading dbGaPCheckup_1.1.0.tar.gz ... ok downloading ggblanket_12.4.0.tar.gz ... ok downloading ggformula_0.12.2.tar.gz ... ok downloading growthcleanr_2.2.0.tar.gz ... ok downloading guideR_0.4.1.tar.gz ... ok downloading jsmodule_1.6.13.tar.gz ... ok downloading jstable_1.3.17.tar.gz ... ok downloading opalr_3.4.2.tar.gz ... ok downloading pollster_0.1.6.tar.gz ... ok downloading questionr_0.8.1.tar.gz ... ok downloading readabs_0.4.19.tar.gz ... ok downloading REDCapDM_0.9.9.tar.gz ... ok downloading retroharmonize_0.2.0.tar.gz ... ok downloading robotoolbox_1.4.tar.gz ... ok downloading Rrepest_1.5.4.tar.gz ... ok downloading rUM_2.2.0.tar.gz ... ok downloading SEERaBomb_2019.2.tar.gz ... ok downloading spicy_0.1.0.tar.gz ... ok downloading stevemisc_1.8.0.tar.gz ... ok downloading surveyPrev_1.0.0.tar.gz ... ok downloading tableone_0.13.2.tar.gz ... ok downloading crane_0.2.0.tar.gz ... ok downloading dm_1.0.12.tar.gz ... ok downloading forestmodel_0.6.2.tar.gz ... ok downloading GGally_2.4.0.tar.gz ... ok downloading ggeasy_0.1.6.tar.gz ... ok downloading ggstats_0.11.0.tar.gz ... ok downloading modelsummary_2.5.0.tar.gz ... ok downloading nettskjemar_1.0.4.tar.gz ... ok downloading plotor_0.7.0.tar.gz ... ok downloading readstata13_0.11.0.tar.gz ... ok downloading REDCapTidieR_1.2.4.tar.gz ... ok downloading saros_1.5.4.tar.gz ... ok downloading saros.base_1.1.0.tar.gz ... ok downloading speedycode_0.3.0.tar.gz ... ok downloading tabxplor_1.3.0.tar.gz ... ok downloading testdat_0.4.3.tar.gz ... ok downloading xportr_0.4.3.tar.gz ... ok downloading zmisc_0.2.3.tar.gz ... ok installing dependencies ‘airports’, ‘altdoc’, ‘argparser’, ‘bcrypt’, ‘chemometrics’, ‘datamods’, ‘demography’, ‘detectseparation’, ‘did’, ‘epiDisplay’, ‘expss’, ‘forestploter’, ‘ggblend’, ‘ggiraph’, ‘ggplot2movies’, ‘glmtoolbox’, ‘gtExtras’, ‘hutils’, ‘INLA’, ‘inspectdf’, ‘jskm’, ‘jstable’, ‘knitrBootstrap’, ‘labelled’, ‘LaF’, ‘likert’, ‘logitr’, ‘margins’, ‘metacore’, ‘mschart’, ‘multgee’, ‘naniar’, ‘pandoc’, ‘pharmaverseadam’, ‘pixarfilms’, ‘Rdatasets’, ‘rdflib’, ‘rdhs’, ‘readroper’, ‘REDCapR’, ‘rmdpartials’, ‘rosetta’, ‘scagnostics’, ‘shinycustomloader’, ‘SUMMER’, ‘survIDINRI’, ‘svyVGAM’, ‘tidycmprsk’, ‘ufs’ Warning: package ‘INLA’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘prediction’, ‘sjstats’, ‘phosphoricons’, ‘toastui’, ‘survC1’, ‘ftsa’, ‘HMDHFDplus’, ‘shadowtext’, ‘som’, ‘DRDID’, ‘ROI.plugin.lpsolve’, ‘maditr’ begin installing package ‘prediction’ begin installing package ‘sjstats’ begin installing package ‘survC1’ begin installing package ‘phosphoricons’ begin installing package ‘ftsa’ begin installing package ‘som’ begin installing package ‘HMDHFDplus’ begin installing package ‘DRDID’ begin installing package ‘ROI.plugin.lpsolve’ begin installing package ‘glmtoolbox’ begin installing package ‘logitr’ begin installing package ‘maditr’ begin installing package ‘multgee’ begin installing package ‘tidycmprsk’ begin installing package ‘svyVGAM’ begin installing package ‘inspectdf’ begin installing package ‘rmdpartials’ begin installing package ‘likert’ begin installing package ‘rdflib’ begin installing package ‘naniar’ begin installing package ‘ggblend’ begin installing package ‘ggplot2movies’ begin installing package ‘argparser’ begin installing package ‘epiDisplay’ begin installing package ‘forestploter’ begin installing package ‘jskm’ begin installing package ‘shinycustomloader’ begin installing package ‘knitrBootstrap’ * installing *source* package ‘rmdpartials’ ... ** this is package ‘rmdpartials’ version ‘0.5.8’ ** package ‘rmdpartials’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdpartials) begin installing package ‘hutils’ * installing *source* package ‘argparser’ ... ** this is package ‘argparser’ version ‘0.7.2’ ** package ‘argparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (argparser) begin installing package ‘REDCapR’ * installing *source* package ‘shinycustomloader’ ... ** this is package ‘shinycustomloader’ version ‘0.9.0’ ** package ‘shinycustomloader’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinycustomloader) begin installing package ‘LaF’ * installing *source* package ‘ggplot2movies’ ... ** this is package ‘ggplot2movies’ version ‘0.0.1’ ** package ‘ggplot2movies’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplot2movies) begin installing package ‘rdhs’ * installing *source* package ‘maditr’ ... ** this is package ‘maditr’ version ‘0.8.6’ ** package ‘maditr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maditr) begin installing package ‘pharmaverseadam’ * installing *source* package ‘ROI.plugin.lpsolve’ ... ** this is package ‘ROI.plugin.lpsolve’ version ‘1.0-2’ ** package ‘ROI.plugin.lpsolve’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ROI.plugin.lpsolve) begin installing package ‘pixarfilms’ * installing *source* package ‘knitrBootstrap’ ... ** this is package ‘knitrBootstrap’ version ‘1.0.3’ ** package ‘knitrBootstrap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitrBootstrap) begin installing package ‘airports’ * installing *source* package ‘phosphoricons’ ... ** this is package ‘phosphoricons’ version ‘0.2.1’ ** package ‘phosphoricons’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phosphoricons) begin installing package ‘scagnostics’ * installing *source* package ‘som’ ... ** this is package ‘som’ version ‘0.3-5.2’ ** package ‘som’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOAjQi0/R.INSTALL3a4feb5bc79a63/som/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c som.cc -o som.o In file included from tntsupp.h:8, from sub.h:1, from SomParam.h:2, from som.cc:4: tnt/fmat.h: In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘*this.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘double rect_dist(TNT::Region2D >, TNT::Region2D >)’ at SomParam.h:11:19: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘TNT::Subscript find_winner(TNT::DMatrix&, TNT::Subscript, TNT::DMatrix&)’ at som.cc:12:40: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘TNT::Subscript find_winner(TNT::DMatrix&, TNT::Subscript, TNT::DMatrix&)’ at som.cc:16:36: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘void visual(TNT::DMatrix&, TNT::DMatrix&, TNT::DMatrix&, TNT::DMatrix&)’ at som.cc:57:36: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘int update(TNT::DMatrix&, TNT::DMatrix&, TNT::Subscript, double, TNT::DVector&)’ at som.cc:32:24: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘double qerror(TNT::DMatrix&, TNT::DMatrix&, TNT::DMatrix&, TNT::DMatrix&, SomParam&)’ at som.cc:76:38: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘void som_top(TNT::DMatrix&, TNT::DMatrix&, TNT::DMatrix&, SomParam&, SomParam&, double*)’ at som.cc:108:1: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘cord.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som_bat(SEXP, SEXP, SEXP, SEXP)’ at som.cc:225:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Vis.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som_bat(SEXP, SEXP, SEXP, SEXP)’ at som.cc:225:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Code.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som_bat(SEXP, SEXP, SEXP, SEXP)’ at som.cc:225:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Data.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som(SEXP, SEXP, SEXP)’ at som.cc:198:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Vis.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som(SEXP, SEXP, SEXP)’ at som.cc:198:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Cord.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som(SEXP, SEXP, SEXP)’ at som.cc:198:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Code.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ In member function ‘void TNT::Fortran_Matrix::destroy() [with T = double]’, inlined from ‘TNT::Fortran_Matrix::~Fortran_Matrix() [with T = double]’ at tnt/fmat.h:211:16, inlined from ‘SEXPREC* som(SEXP, SEXP, SEXP)’ at som.cc:198:3: tnt/fmat.h:161:9: warning: ‘void operator delete [](void*)’ called on pointer ‘Data.TNT::Fortran_Matrix::col_’ with nonzero offset 8 [-Wfree-nonheap-object] 161 | delete [] (col_); | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o som.so som.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOAjQi0/R.INSTALL3a4feb5bc79a63/som/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-som/00new/som/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (som) begin installing package ‘altdoc’ * installing *source* package ‘prediction’ ... ** this is package ‘prediction’ version ‘0.3.18’ ** package ‘prediction’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prediction) begin installing package ‘gtExtras’ * installing *source* package ‘forestploter’ ... ** this is package ‘forestploter’ version ‘1.1.3’ ** package ‘forestploter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestploter) begin installing package ‘pandoc’ * installing *source* package ‘logitr’ ... ** this is package ‘logitr’ version ‘1.1.2’ ** package ‘logitr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (logitr) begin installing package ‘Rdatasets’ * installing *source* package ‘sjstats’ ... ** this is package ‘sjstats’ version ‘0.19.1’ ** package ‘sjstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sjstats) begin installing package ‘mschart’ * installing *source* package ‘airports’ ... ** this is package ‘airports’ version ‘0.1.0’ ** package ‘airports’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (airports) begin installing package ‘bcrypt’ * installing *source* package ‘rdflib’ ... ** this is package ‘rdflib’ version ‘0.2.9’ ** package ‘rdflib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rdflib) begin installing package ‘readroper’ * installing *source* package ‘pixarfilms’ ... ** this is package ‘pixarfilms’ version ‘0.2.1’ ** package ‘pixarfilms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pixarfilms) begin installing package ‘metacore’ * installing *source* package ‘HMDHFDplus’ ... ** this is package ‘HMDHFDplus’ version ‘2.0.6’ ** package ‘HMDHFDplus’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HMDHFDplus) begin installing package ‘labelled’ * installing *source* package ‘survC1’ ... ** this is package ‘survC1’ version ‘1.0-3’ ** package ‘survC1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCPBjBI/R.INSTALL3a4fc423b46bfe/survC1/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c husurvC1v1.f -o husurvC1v1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survC1_init.c -o survC1_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o survC1.so husurvC1v1.o survC1_init.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCPBjBI/R.INSTALL3a4fc423b46bfe/survC1/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survC1/00new/survC1/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survC1) * installing *source* package ‘hutils’ ... ** this is package ‘hutils’ version ‘1.8.1’ ** package ‘hutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hutils) begin installing package ‘ggiraph’ begin installing package ‘toastui’ * installing *source* package ‘Rdatasets’ ... ** this is package ‘Rdatasets’ version ‘0.0.1’ ** package ‘Rdatasets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rdatasets) begin installing package ‘margins’ * installing *source* package ‘scagnostics’ ... ** this is package ‘scagnostics’ version ‘0.2-6’ ** package ‘scagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scagnostics) begin installing package ‘ufs’ * installing *source* package ‘altdoc’ ... ** this is package ‘altdoc’ version ‘0.5.0’ ** package ‘altdoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (altdoc) begin installing package ‘survIDINRI’ * installing *source* package ‘ggblend’ ... ** this is package ‘ggblend’ version ‘0.1.0’ ** package ‘ggblend’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggblend) begin installing package ‘chemometrics’ * installing *source* package ‘likert’ ... ** this is package ‘likert’ version ‘1.3.5.1’ ** package ‘likert’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (likert) begin installing package ‘detectseparation’ * installing *source* package ‘readroper’ ... ** this is package ‘readroper’ version ‘0.9.3’ ** package ‘readroper’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readroper) begin installing package ‘expss’ * installing *source* package ‘pandoc’ ... ** this is package ‘pandoc’ version ‘0.2.0’ ** package ‘pandoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pandoc) * installing *source* package ‘svyVGAM’ ... ** this is package ‘svyVGAM’ version ‘1.2-17’ ** package ‘svyVGAM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (svyVGAM) * installing *source* package ‘REDCapR’ ... ** this is package ‘REDCapR’ version ‘1.5.0’ ** package ‘REDCapR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (REDCapR) * installing *source* package ‘naniar’ ... ** this is package ‘naniar’ version ‘1.1.0’ ** package ‘naniar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (naniar) * installing *source* package ‘rdhs’ ... ** this is package ‘rdhs’ version ‘0.8.1’ ** package ‘rdhs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rdhs) * installing *source* package ‘bcrypt’ ... ** this is package ‘bcrypt’ version ‘1.2.0’ ** package ‘bcrypt’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpi2YPYb/R.INSTALL3a55eb65445fcd/bcrypt/src' rm -f bcrypt.so bcrypt_r.o register.o bcrypt/libstatbcrypt.a bcrypt/bcrypt.o bcrypt/blowfish.o bcrypt/bcrypt_pbkdf.o bcrypt/sha2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcrypt_r.c -o bcrypt_r.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcrypt/bcrypt.c -o bcrypt/bcrypt.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcrypt/blowfish.c -o bcrypt/blowfish.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ibcrypt -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bcrypt/sha2.c -o bcrypt/sha2.o ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt.o bcrypt/blowfish.o bcrypt/bcrypt_pbkdf.o bcrypt/sha2.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o bcrypt.so bcrypt_r.o register.o -Lbcrypt -lstatbcrypt -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpi2YPYb/R.INSTALL3a55eb65445fcd/bcrypt/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bcrypt/00new/bcrypt/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bcrypt) * installing *source* package ‘detectseparation’ ... ** this is package ‘detectseparation’ version ‘0.3’ ** package ‘detectseparation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (detectseparation) * installing *source* package ‘mschart’ ... ** this is package ‘mschart’ version ‘0.4.1’ ** package ‘mschart’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mschart) * installing *source* package ‘tidycmprsk’ ... ** this is package ‘tidycmprsk’ version ‘1.1.0’ ** package ‘tidycmprsk’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidycmprsk) * installing *source* package ‘margins’ ... ** this is package ‘margins’ version ‘0.3.28’ ** package ‘margins’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (margins) * installing *source* package ‘toastui’ ... ** this is package ‘toastui’ version ‘0.4.0’ ** package ‘toastui’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toastui) begin installing package ‘datamods’ * installing *source* package ‘chemometrics’ ... ** this is package ‘chemometrics’ version ‘1.4.4’ ** package ‘chemometrics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (chemometrics) * installing *source* package ‘labelled’ ... ** this is package ‘labelled’ version ‘2.15.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labelled) begin installing package ‘jstable’ * installing *source* package ‘metacore’ ... ** this is package ‘metacore’ version ‘0.2.1’ ** package ‘metacore’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metacore) * installing *source* package ‘survIDINRI’ ... ** this is package ‘survIDINRI’ version ‘1.1-2’ ** package ‘survIDINRI’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-3) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3N1iZu/R.INSTALL3a57c131650c15/survIDINRI/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survIDINRI_init.c -o survIDINRI_init.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c unoecdfv1.f -o unoecdfv1.o unoecdfv1.f:7:72: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1 Warning: Line truncated at (1) [-Wline-truncation] unoecdfv1.f:13:17: 13 | TMP2=TMP2+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:15:20: 15 | TMP1=TMP1+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:7:70: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1~~ Warning: Unused variable ‘tmp’ declared at (1) [-Wunused-variable] gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o survIDINRI.so survIDINRI_init.o unoecdfv1.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3N1iZu/R.INSTALL3a57c131650c15/survIDINRI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survIDINRI/00new/survIDINRI/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survIDINRI) * installing *source* package ‘jskm’ ... ** this is package ‘jskm’ version ‘0.5.16’ ** package ‘jskm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jskm) * installing *source* package ‘DRDID’ ... ** this is package ‘DRDID’ version ‘1.2.2’ ** package ‘DRDID’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpx3cs5M/R.INSTALL3a4fcf2f88244/DRDID/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sanity_checks.cpp -o sanity_checks.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o DRDID.so RcppExports.o sanity_checks.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpx3cs5M/R.INSTALL3a4fcf2f88244/DRDID/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DRDID/00new/DRDID/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DRDID) begin installing package ‘did’ * installing *source* package ‘epiDisplay’ ... ** this is package ‘epiDisplay’ version ‘3.5.0.2’ ** package ‘epiDisplay’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (epiDisplay) * installing *source* package ‘gtExtras’ ... ** this is package ‘gtExtras’ version ‘0.6.0’ ** package ‘gtExtras’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtExtras) * installing *source* package ‘inspectdf’ ... ** this is package ‘inspectdf’ version ‘0.0.12.1’ ** package ‘inspectdf’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp21Oysq/R.INSTALL3a500b6880db87/inspectdf/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c count_levels.cpp -o count_levels.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c na_count.cpp -o na_count.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o inspectdf.so RcppExports.o count_levels.o na_count.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp21Oysq/R.INSTALL3a500b6880db87/inspectdf/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-inspectdf/00new/inspectdf/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (inspectdf) * installing *source* package ‘ufs’ ... ** this is package ‘ufs’ version ‘25.7.1’ ** package ‘ufs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ufs) begin installing package ‘rosetta’ * installing *source* package ‘glmtoolbox’ ... ** this is package ‘glmtoolbox’ version ‘0.1.12’ ** package ‘glmtoolbox’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmtoolbox) * installing *source* package ‘multgee’ ... ** this is package ‘multgee’ version ‘1.9.0’ ** package ‘multgee’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpObPwmJ/R.INSTALL3a4fef4915ce93/multgee/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’ 71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c code.cpp -o code.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from code.cpp:1: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.’ 71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o multgee.so RcppExports.o code.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpObPwmJ/R.INSTALL3a4fef4915ce93/multgee/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-multgee/00new/multgee/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multgee) * installing *source* package ‘datamods’ ... ** this is package ‘datamods’ version ‘1.5.3’ ** package ‘datamods’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datamods) * installing *source* package ‘expss’ ... ** this is package ‘expss’ version ‘0.11.6’ ** package ‘expss’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (expss) * installing *source* package ‘ftsa’ ... ** this is package ‘ftsa’ version ‘6.6’ ** package ‘ftsa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ftsa) begin installing package ‘demography’ * installing *source* package ‘did’ ... ** this is package ‘did’ version ‘2.1.2’ ** package ‘did’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (did) * installing *source* package ‘jstable’ ... ** this is package ‘jstable’ version ‘1.3.17’ ** package ‘jstable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jstable) * installing *source* package ‘rosetta’ ... ** this is package ‘rosetta’ version ‘0.3.12’ ** package ‘rosetta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location Registered S3 methods overwritten by 'ufs': method from pander.crossTab rosetta pander.freq rosetta print.crossTab rosetta print.freq rosetta ** testing if installed package keeps a record of temporary installation path * DONE (rosetta) * installing *source* package ‘LaF’ ... ** this is package ‘LaF’ version ‘0.8.6’ ** package ‘LaF’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXtl5SJ/R.INSTALL3a53251f22fe0c/LaF/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LaF.cpp -o LaF.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c column.cpp -o column.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c conversion.cpp -o conversion.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c csvreader.cpp -o csvreader.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c doublecolumn.cpp -o doublecolumn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c factorcolumn.cpp -o factorcolumn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c file.cpp -o file.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fwfreader.cpp -o fwfreader.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c intcolumn.cpp -o intcolumn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c reader.cpp -o reader.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c readermanager.cpp -o readermanager.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c stats.cpp -o stats.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c stringcolumn.cpp -o stringcolumn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c textutils.cpp -o textutils.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o LaF.so LaF.o column.o conversion.o csvreader.o doublecolumn.o factorcolumn.o file.o fwfreader.o init.o intcolumn.o reader.o readermanager.o stats.o stringcolumn.o textutils.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXtl5SJ/R.INSTALL3a53251f22fe0c/LaF/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-LaF/00new/LaF/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘nrow’ from package ‘base’ in package ‘LaF’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘LaF’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LaF) * installing *source* package ‘demography’ ... ** this is package ‘demography’ version ‘2.0’ ** package ‘demography’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (demography) * installing *source* package ‘ggiraph’ ... ** this is package ‘ggiraph’ version ‘0.9.1’ ** package ‘ggiraph’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-3) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGhyFv5/R.INSTALL3a56dc257440ef/ggiraph/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c a_color.cpp -o a_color.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c clip.cpp -o clip.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from clip.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dsvg.cpp -o dsvg.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from dsvg.cpp:9: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dsvg_dev.cpp -o dsvg_dev.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg_dev.cpp:1: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c geom.cpp -o geom.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c indexed.cpp -o indexed.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interactive.cpp -o interactive.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from interactive.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mask.cpp -o mask.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from mask.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pattern.cpp -o pattern.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from pattern.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c raster.cpp -o raster.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from raster.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c shapes.cpp -o shapes.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from shapes.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svg.cpp -o svg.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c text.cpp -o text.o In file included from interactive.h:7, from dsvg_dev.h:7, from dsvg.h:7, from text.cpp:4: indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ interactive.h:23:9: note: by ‘INDEX InteractiveElements::push(SVGElement*)’ 23 | INDEX push(SVGElement* el); | ^~~~ indexed.h:29:17: warning: ‘virtual INDEX IndexedElements::push(SVGElement*, const bool&)’ was hidden [-Woverloaded-virtual=] 29 | virtual INDEX push(SVGElement* el, const bool& add_id = true); | ^~~~ In file included from dsvg_dev.h:8: clip.h:27:9: note: by ‘INDEX Clips::push(SVGElement*, const char*)’ 27 | INDEX push(SVGElement* el, const char* key = NULL); | ^~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tinyxml2.cpp -o tinyxml2.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o ggiraph.so RcppExports.o a_color.o clip.o dsvg.o dsvg_dev.o geom.o indexed.o interactive.o mask.o pattern.o raster.o shapes.o svg.o text.o tinyxml2.o utils.o -lpng -lz -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGhyFv5/R.INSTALL3a56dc257440ef/ggiraph/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ggiraph/00new/ggiraph/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggiraph) begin installing package ‘shadowtext’ * installing *source* package ‘shadowtext’ ... ** this is package ‘shadowtext’ version ‘0.1.6’ ** package ‘shadowtext’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shadowtext) begin installing package ‘SUMMER’ * installing *source* package ‘SUMMER’ ... ** this is package ‘SUMMER’ version ‘2.0.0’ ** package ‘SUMMER’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SUMMER) * installing *source* package ‘pharmaverseadam’ ... ** this is package ‘pharmaverseadam’ version ‘1.2.0’ ** package ‘pharmaverseadam’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pharmaverseadam) checking labelled_2.15.0.tar.gz ... checking broom.helpers_1.21.0.tar.gz ... checking bulkreadr_1.2.1.tar.gz ... checking cesR_0.1.0.tar.gz ... checking codebook_0.9.6.tar.gz ... checking crosswalkr_0.3.0.tar.gz ... checking datadictionary_1.0.1.tar.gz ... checking dataset_0.4.0.tar.gz ... checking dataviewR_0.1.1.tar.gz ... checking dbGaPCheckup_1.1.0.tar.gz ... checking ggformula_0.12.2.tar.gz ... checking ggblanket_12.4.0.tar.gz ... checking growthcleanr_2.2.0.tar.gz ... checking guideR_0.4.1.tar.gz ... checking jsmodule_1.6.13.tar.gz ... checking jstable_1.3.17.tar.gz ... checking opalr_3.4.2.tar.gz ... checking pollster_0.1.6.tar.gz ... checking questionr_0.8.1.tar.gz ... checking readabs_0.4.19.tar.gz ... checking REDCapDM_0.9.9.tar.gz ... checking retroharmonize_0.2.0.tar.gz ... checking robotoolbox_1.4.tar.gz ... checking Rrepest_1.5.4.tar.gz ... checking rUM_2.2.0.tar.gz ... checking SEERaBomb_2019.2.tar.gz ... checking spicy_0.1.0.tar.gz ... checking stevemisc_1.8.0.tar.gz ... checking dm_1.0.12.tar.gz ... checking GGally_2.4.0.tar.gz ... checking ggeasy_0.1.6.tar.gz ... checking modelsummary_2.5.0.tar.gz ... checking testdat_0.4.3.tar.gz ... checking saros_1.5.4.tar.gz ... checking xportr_0.4.3.tar.gz ... checking REDCapTidieR_1.2.4.tar.gz ... checking surveyPrev_1.0.0.tar.gz ... checking ggstats_0.11.0.tar.gz ... checking tabxplor_1.3.0.tar.gz ... checking crane_0.2.0.tar.gz ... checking nettskjemar_1.0.4.tar.gz ... checking forestmodel_0.6.2.tar.gz ... checking plotor_0.7.0.tar.gz ... checking readstata13_0.11.0.tar.gz ... checking tableone_0.13.2.tar.gz ... checking speedycode_0.3.0.tar.gz ... checking saros.base_1.1.0.tar.gz ... checking zmisc_0.2.3.tar.gz ... Depends: Package: labelled Depends: R (>= 3.2) Imports: haven (>= 2.4.1), cli, dplyr (>= 1.1.0), lifecycle, rlang (>= 1.1.0), vctrs, stringr, tidyr, tidyselect Timings: user system elapsed labelled 74.261 6.692 84.399 Results: Check status summary: ERROR NOTE OK Source packages 0 0 1 Reverse depends 2 4 41 Check results summary: labelled ... OK rdepends_broom.helpers ... OK rdepends_bulkreadr ... OK rdepends_cesR ... NOTE * checking package subdirectories ... NOTE rdepends_codebook ... OK rdepends_crane ... OK rdepends_crosswalkr ... OK rdepends_datadictionary ... OK rdepends_dataset ... OK rdepends_dataviewR ... OK rdepends_dbGaPCheckup ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_dm ... OK rdepends_forestmodel ... OK rdepends_GGally ... OK rdepends_ggblanket ... OK rdepends_ggeasy ... OK rdepends_ggformula ... ERROR * checking for code/documentation mismatches ... WARNING * checking examples ... [14s/14s] ERROR * checking tests ... [17s/18s] ERROR rdepends_ggstats ... OK rdepends_growthcleanr ... OK rdepends_guideR ... OK rdepends_jsmodule ... OK rdepends_jstable ... OK rdepends_modelsummary ... OK rdepends_nettskjemar ... OK rdepends_opalr ... OK rdepends_plotor ... OK rdepends_pollster ... ERROR * checking re-building of vignette outputs ... [13s/13s] ERROR rdepends_questionr ... OK rdepends_readabs ... OK rdepends_readstata13 ... OK rdepends_REDCapDM ... OK rdepends_REDCapTidieR ... OK rdepends_retroharmonize ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_robotoolbox ... OK rdepends_Rrepest ... OK rdepends_rUM ... OK rdepends_saros.base ... OK rdepends_saros ... OK rdepends_SEERaBomb ... OK rdepends_speedycode ... OK rdepends_spicy ... OK rdepends_stevemisc ... OK rdepends_surveyPrev ... OK rdepends_tableone ... OK rdepends_tabxplor ... OK rdepends_testdat ... OK rdepends_xportr ... OK rdepends_zmisc ... NOTE * checking DESCRIPTION meta-information ... NOTE Check results changes: Package: forestmodel Check: CRAN incoming feasibility Old result: NOTE Package: pollster Check: CRAN incoming feasibility Old result: NOTE Package: saros Check: examples Old result: ERROR New result: OK Package: saros Check: tests Old result: ERROR New result: OK Package: zmisc Check: CRAN incoming feasibility Old result: NOTE