Package: lwqs Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘lwqs-vignette.Rmd’ using rmarkdown Quitting from lwqs-vignette.Rmd:201-219 [unnamed-chunk-8] Execution halted Package: NeEDS4BigData Check: tests New result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [48s/48s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(NeEDS4BigData) > > test_check("NeEDS4BigData") ERROR : 47 system is computationally singular: reciprocal condition number = 3.8405e-19 Saving _problems/test-modelRobustLogSub-36.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 338 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-modelRobustLogSub.R:30:1'): (code run outside of `test_that()`) ── Error in `modelRobustLogSub(r0 = r0, rf = rf, Y = as.matrix(Original_Data[, colnames(Original_Data) %in% c("Y")]), X = as.matrix(Original_Data[, -1]), N = nrow(Original_Data), Apriori_probs = rep(1/length(All_Models), length(All_Models)), All_Combinations = All_Models, All_Covariates = colnames(Original_Data)[-1])`: There are NA or NaN values in the model parameters Backtrace: ▆ 1. ├─base::suppressMessages(...) at test-modelRobustLogSub.R:30:1 2. │ └─base::withCallingHandlers(...) 3. ├─base::suppressWarnings(...) 4. │ └─base::withCallingHandlers(...) 5. └─NeEDS4BigData::modelRobustLogSub(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 338 ] Error: ! Test failures. Execution halted Package: tsfeatures Check: examples New result: ERROR Running examples in ‘tsfeatures-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: yahoo_data > ### Title: Yahoo server metrics > ### Aliases: yahoo_data > > ### ** Examples > > yahoo <- yahoo_data() trying URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda' Warning in utils::download.file("https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda", : cannot open URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda': HTTP status was '504 Gateway Timeout' Error in utils::download.file("https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda", : cannot open URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda' Calls: yahoo_data -> Execution halted Package: tsfeatures Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘tsfeatures.Rmd’ using rmarkdown trying URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda' Quitting from tsfeatures.Rmd:326-331 [yahoo] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `utils::download.file()`: ! cannot open URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda' --- Backtrace: ▆ 1. └─tsfeatures::yahoo_data() 2. └─utils::download.file(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tsfeatures.Rmd' failed with diagnostics: cannot open URL 'https://github.com/robjhyndman/tsfeatures/raw/master/extra-data/yahoo.rda' --- failed re-building ‘tsfeatures.Rmd’ SUMMARY: processing the following file failed: ‘tsfeatures.Rmd’ Error: Vignette re-building failed. Execution halted Package: valh Check: examples New result: ERROR Running examples in ‘valh-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: vl_status > ### Title: Get Valhalla Service Status > ### Aliases: vl_status > > ### ** Examples > > vl_status("https://valhalla1.openstreetmap.de/", verbose = FALSE) Error: Valhalla API request failed [429] Execution halted Package: wcde Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘wcde.Rmd’ using rmarkdown Quitting from wcde.Rmd:203-207 [unnamed-chunk-18] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `dplyr::mutate()`: ℹ In argument: `d = purrr::map(.x = u, .f = ~read_with_progress(f = .x))`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `readRDS()`: ! cannot open the connection to 'https://github.com/guyabel/wcde-data/raw/master/wcde-v2-single/2/etfr/edu.rds' --- Backtrace: ▆ 1. ├─wcde::get_wcde(...) 2. │ ├─... %>% ... 3. │ └─wcde::get_wcde_single(...) 4. │ └─... %>% dplyr::ungroup() 5. ├─dplyr::left_join(., wic_locations_v, by = "isono") 6. ├─dplyr::mutate(., isono = as.numeric(isono)) 7. ├─dplyr::ungroup(.) 8. ├─dplyr::reframe(., dplyr::bind_cols(d)) 9. ├─dplyr::group_by(., scenario) 10. ├─dplyr::mutate(., d = purrr::map(.x = u, .f = ~read_with_progress(f = .x))) 11. ├─dplyr:::mutate.data.frame(., d = purrr::map(.x = u, .f = ~read_with_progress(f = .x))) 12. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. │ ├─base::withCallingHandlers(...) 14. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. │ └─mask$eval_all_mutate(quo) 16. │ └─dplyr (local) eval() 17. ├─purrr::map(.x = u, .f = ~read_with_progress(f = .x)) 18. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress) 19. │ ├─purrr:::with_indexed_errors(...) 20. │ │ └─base::withCallingHandlers(...) 21. │ ├─purrr:::call_with_cleanup(...) 22. │ └─wcde (local) .f(.x[[i]], ...) 23. │ └─wcde (local) read_with_progress(f = .x) 24. │ └─f %>% url() %>% readRDS() 25. └─base::readRDS(.) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'wcde.Rmd' failed with diagnostics: ℹ In argument: `d = purrr::map(.x = u, .f = ~read_with_progress(f = .x))`. Caused by error in `purrr::map()`: ℹ In index: 1. Caused by error in `readRDS()`: ! cannot open the connection to 'https://github.com/guyabel/wcde-data/raw/master/wcde-v2-single/2/etfr/edu.rds' --- failed re-building ‘wcde.Rmd’ SUMMARY: processing the following file failed: ‘wcde.Rmd’ Error: Vignette re-building failed. Execution halted