downloading reverse dependencies ‘ARMALSTM’, ‘autokeras’, ‘autotab’, ‘codacore’, ‘codez’, ‘cramR’, ‘criticality’, ‘deepspat’, ‘FuncNN’, ‘gnn’, ‘imageseg’, ‘iSubGen’, ‘janus’, ‘LDNN’, ‘LilRhino’, ‘MantaID’, ‘MBMethPred’, ‘ML2Pvae’, ‘mnda’, ‘neuralGAM’, ‘PLEXI’, ‘ProcData’, ‘processpredictR’, ‘roseRF’, ‘rTLsDeep’, ‘snap’, ‘soundClass’, ‘SPORTSCausal’, ‘tfaddons’, ‘tfNeuralODE’, ‘tfprobability’, ‘TraceAssist’, ‘transformerForecasting’, ‘TSLSTM’, ‘TSLSTMplus’, ‘tsLSTMx’, ‘TSPred’, ‘bamlss’, ‘bundle’, ‘cloudml’, ‘condvis2’, ‘counterfactuals’, ‘dimRed’, ‘drake’, ‘fastml’, ‘iml’, ‘innsight’, ‘lime’, ‘mlflow’, ‘mrbin’, ‘multiRL’, ‘nn2poly’, ‘parsnip’, ‘pdp’, ‘PhysicalActivity’, ‘PortfolioTesteR’, ‘qeML’, ‘RegimeChange’, ‘regtools’, ‘seriation’, ‘survivalmodels’, ‘targets’, ‘tfhub’, ‘tidylearn’, ‘vetiver’, ‘vivid’ trying URL 'file:///data/Repositories/CRAN/src/contrib/ARMALSTM_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/autokeras_1.0.12.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/autotab_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/codacore_0.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/codez_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cramR_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/criticality_0.9.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/deepspat_0.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/FuncNN_1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/gnn_0.0-5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/imageseg_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/iSubGen_1.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/janus_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/LDNN_1.10.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/LilRhino_1.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/MantaID_1.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/MBMethPred_0.1.4.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ML2Pvae_1.0.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mnda_1.0.9.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/neuralGAM_2.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PLEXI_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ProcData_0.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/processpredictR_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/roseRF_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rTLsDeep_0.0.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/snap_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/soundClass_0.0.9.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SPORTSCausal_1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tfaddons_0.10.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tfNeuralODE_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tfprobability_0.15.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TraceAssist_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/transformerForecasting_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TSLSTM_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TSLSTMplus_1.0.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tsLSTMx_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TSPred_5.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bamlss_1.2-5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bundle_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cloudml_0.7.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/condvis2_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/counterfactuals_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dimRed_0.2.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/drake_7.13.11.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/fastml_0.7.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/iml_0.11.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/innsight_0.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/lime_0.5.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mlflow_3.9.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mrbin_1.9.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/multiRL_0.2.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nn2poly_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/parsnip_1.4.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pdp_0.8.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PhysicalActivity_0.2-4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PortfolioTesteR_0.1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/qeML_1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RegimeChange_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/regtools_1.7.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/seriation_1.5.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/survivalmodels_0.1.191.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/targets_1.12.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tfhub_0.8.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tidylearn_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vetiver_0.2.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vivid_0.3.0.tar.gz' installing dependencies ‘abc’, ‘aggregation’, ‘ALEPlot’, ‘AllMetrics’, ‘AmesHousing’, ‘aorsf’, ‘arulesViz’, ‘autoimage’, ‘autometric’, ‘baguette’, ‘BayesX’, ‘bindr’, ‘bonsai’, ‘bundle’, ‘CausalImpact’, ‘cccd’, ‘cdparcoord’, ‘censored’, ‘cereal’, ‘clustermq’, ‘cmaes’, ‘condvis2’, ‘ConsensusClusterPlus’, ‘coRanking’, ‘crew’, ‘dbplyr’, ‘deepnet’, ‘DendSer’, ‘diffusionMap’, ‘discrim’, ‘disk.frame’, ‘distributions3’, ‘DRR’, ‘edeaR’, ‘elmNNRcpp’, ‘embed’, ‘fairmodels’, ‘finetune’, ‘flashlight’, ‘flux’, ‘FOCI’, ‘future.batchtools’, ‘glmnetUtils’, ‘glogis’, ‘googleCloudStorageR’, ‘httr’, ‘ICEbox’, ‘JOUSBoost’, ‘JuliaCall’, ‘keras’, ‘lime’, ‘luz’, ‘miesmuschel’, ‘mlr3data’, ‘mlr3hyperband’, ‘mltools’, ‘modelStudio’, ‘narray’, ‘NeuralNetTools’, ‘nvmix’, ‘onnx’, ‘partools’, ‘paws.machine.learning’, ‘pcaL1’, ‘plsmod’, ‘polyreg’, ‘prettycode’, ‘probably’, ‘pseudo’, ‘qrmdata’, ‘rapidoc’, ‘rchallenge’, ‘regtools’, ‘reticulate’, ‘scagnostics’, ‘scutr’, ‘sdPrior’, ‘smdocker’, ‘SNFtool’, ‘sp’, ‘sparsediscrim’, ‘SpatialExtremes’, ‘spdep’, ‘stacks’, ‘StatRank’, ‘survRM2’, ‘tarchetypes’, ‘tfdatasets’, ‘tfestimators’, ‘tfprobability’, ‘themis’, ‘torchvision’, ‘toweranNA’, ‘trtf’, ‘tuneRanger’, ‘txtplot’, ‘txtq’, ‘vdiffr’, ‘vetiver’, ‘zCompositions’, ‘zenplots’ Warning: packages ‘disk.frame’, ‘ALEPlot’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘prettyGraphs’, ‘ALL’, ‘smotefamily’, ‘ExPosition’, ‘bsts’, ‘GB2’, ‘CVST’, ‘ROSE’, ‘abc.data’, ‘freqparcoord’, ‘forge’, ‘paws.compute’, ‘paws.developer.tools’, ‘paws.management’, ‘paws.security.identity’, ‘MetricsWeighted’, ‘PairViz’ begin installing package ‘prettyGraphs’ begin installing package ‘ALL’ begin installing package ‘smotefamily’ begin installing package ‘bsts’ begin installing package ‘GB2’ begin installing package ‘CVST’ begin installing package ‘ROSE’ begin installing package ‘abc.data’ begin installing package ‘freqparcoord’ begin installing package ‘forge’ begin installing package ‘paws.compute’ begin installing package ‘paws.developer.tools’ begin installing package ‘paws.management’ begin installing package ‘paws.security.identity’ begin installing package ‘MetricsWeighted’ begin installing package ‘PairViz’ begin installing package ‘zCompositions’ begin installing package ‘narray’ begin installing package ‘SpatialExtremes’ begin installing package ‘flux’ begin installing package ‘nvmix’ begin installing package ‘qrmdata’ begin installing package ‘StatRank’ begin installing package ‘mlr3hyperband’ begin installing package ‘aggregation’ begin installing package ‘edeaR’ begin installing package ‘mltools’ begin installing package ‘tuneRanger’ * installing *source* package ‘abc.data’ ... ** this is package ‘abc.data’ version ‘1.1’ ** package ‘abc.data’ successfully unpacked and MD5 sums checked ** using staged installation ** data ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abc.data) begin installing package ‘AllMetrics’ * installing *source* package ‘aggregation’ ... ** this is package ‘aggregation’ version ‘1.0.1’ ** package ‘aggregation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aggregation) begin installing package ‘elmNNRcpp’ * installing *source* package ‘MetricsWeighted’ ... ** this is package ‘MetricsWeighted’ version ‘1.0.4’ ** package ‘MetricsWeighted’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MetricsWeighted) begin installing package ‘distributions3’ * installing *source* package ‘ROSE’ ... ** this is package ‘ROSE’ version ‘0.0-4’ ** package ‘ROSE’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ROSE) begin installing package ‘glogis’ * installing *source* package ‘forge’ ... ** this is package ‘forge’ version ‘0.2.0’ ** package ‘forge’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forge) begin installing package ‘bonsai’ * installing *source* package ‘qrmdata’ ... ** this is package ‘qrmdata’ version ‘2025-07-24-3’ ** package ‘qrmdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qrmdata) begin installing package ‘embed’ * installing *source* package ‘prettyGraphs’ ... ** this is package ‘prettyGraphs’ version ‘2.2.0’ ** package ‘prettyGraphs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prettyGraphs) begin installing package ‘luz’ * installing *source* package ‘AllMetrics’ ... ** this is package ‘AllMetrics’ version ‘0.2.1’ ** package ‘AllMetrics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AllMetrics) begin installing package ‘stacks’ * installing *source* package ‘ALL’ ... ** this is package ‘ALL’ version ‘1.52.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ALL) begin installing package ‘torchvision’ * installing *source* package ‘smotefamily’ ... ** this is package ‘smotefamily’ version ‘1.4.0’ ** package ‘smotefamily’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smotefamily) begin installing package ‘DendSer’ * installing *source* package ‘glogis’ ... ** this is package ‘glogis’ version ‘1.0-2’ ** package ‘glogis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glogis) begin installing package ‘scagnostics’ * installing *source* package ‘flux’ ... ** this is package ‘flux’ version ‘0.3-0.1’ ** package ‘flux’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flux) begin installing package ‘glmnetUtils’ * installing *source* package ‘mlr3hyperband’ ... ** this is package ‘mlr3hyperband’ version ‘1.0.0’ ** package ‘mlr3hyperband’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlr3hyperband) begin installing package ‘miesmuschel’ * installing *source* package ‘PairViz’ ... ** this is package ‘PairViz’ version ‘1.3.6’ ** package ‘PairViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PairViz) begin installing package ‘trtf’ * installing *source* package ‘freqparcoord’ ... ** this is package ‘freqparcoord’ version ‘1.0.1’ ** package ‘freqparcoord’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (freqparcoord) * installing *source* package ‘DendSer’ ... ** this is package ‘DendSer’ version ‘1.0.3’ ** package ‘DendSer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1qJjTM/R.INSTALL1004f44936f8de/DendSer/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DendSer_init.c -o DendSer_init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c carct.c -o carct.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cbar.c -o cbar.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clpl.c -o clpl.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cpl.c -o cpl.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o DendSer.so DendSer_init.o carct.o cbar.o clpl.o cpl.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1qJjTM/R.INSTALL1004f44936f8de/DendSer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DendSer/00new/DendSer/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading Warning in seriation::set_criterion_method("dist", "BAR", criterion_method_dist_BAR, : Entry with name ‘BAR’ already exists! Modifying entry. ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DendSer) begin installing package ‘rchallenge’ begin installing package ‘cccd’ * installing *source* package ‘mltools’ ... ** this is package ‘mltools’ version ‘0.3.5’ ** package ‘mltools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mltools) begin installing package ‘coRanking’ * installing *source* package ‘scagnostics’ ... ** this is package ‘scagnostics’ version ‘0.2-6’ ** package ‘scagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scagnostics) begin installing package ‘diffusionMap’ * installing *source* package ‘CVST’ ... ** this is package ‘CVST’ version ‘0.2-3’ ** package ‘CVST’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CVST) begin installing package ‘pcaL1’ * installing *source* package ‘StatRank’ ... ** this is package ‘StatRank’ version ‘0.0.6’ ** package ‘StatRank’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (StatRank) begin installing package ‘txtq’ * installing *source* package ‘GB2’ ... ** this is package ‘GB2’ version ‘2.1.2’ ** package ‘GB2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GB2) begin installing package ‘bindr’ * installing *source* package ‘rchallenge’ ... ** this is package ‘rchallenge’ version ‘1.3.4’ ** package ‘rchallenge’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rchallenge) begin installing package ‘clustermq’ * installing *source* package ‘cccd’ ... ** this is package ‘cccd’ version ‘1.6’ ** package ‘cccd’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cccd) begin installing package ‘prettycode’ * installing *source* package ‘bonsai’ ... ** this is package ‘bonsai’ version ‘0.4.0’ ** package ‘bonsai’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bonsai) begin installing package ‘txtplot’ * installing *source* package ‘zCompositions’ ... ** this is package ‘zCompositions’ version ‘1.6.0’ ** package ‘zCompositions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zCompositions) begin installing package ‘baguette’ * installing *source* package ‘tuneRanger’ ... ** this is package ‘tuneRanger’ version ‘0.8.1’ ** package ‘tuneRanger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tuneRanger) begin installing package ‘discrim’ * installing *source* package ‘txtq’ ... ** this is package ‘txtq’ version ‘0.2.4’ ** package ‘txtq’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (txtq) begin installing package ‘finetune’ * installing *source* package ‘bindr’ ... ** this is package ‘bindr’ version ‘0.1.3’ ** package ‘bindr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bindr) begin installing package ‘plsmod’ * installing *source* package ‘distributions3’ ... ** this is package ‘distributions3’ version ‘0.2.3’ ** package ‘distributions3’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (distributions3) begin installing package ‘probably’ * installing *source* package ‘coRanking’ ... ** this is package ‘coRanking’ version ‘0.2.5’ ** package ‘coRanking’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpv7I0yc/R.INSTALL1007512517e43f/coRanking/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c coranking.cpp -o coranking.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c coranking_main.cpp -o coranking_main.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o coRanking.so coranking.o coranking_main.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpv7I0yc/R.INSTALL1007512517e43f/coRanking/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-coRanking/00new/coRanking/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (coRanking) begin installing package ‘lime’ * installing *source* package ‘prettycode’ ... ** this is package ‘prettycode’ version ‘1.1.0’ ** package ‘prettycode’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prettycode) begin installing package ‘survRM2’ * installing *source* package ‘trtf’ ... ** this is package ‘trtf’ version ‘0.4-3’ ** package ‘trtf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trtf) begin installing package ‘modelStudio’ * installing *source* package ‘txtplot’ ... ** this is package ‘txtplot’ version ‘1.0-5’ ** package ‘txtplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (txtplot) begin installing package ‘fairmodels’ * installing *source* package ‘glmnetUtils’ ... ** this is package ‘glmnetUtils’ version ‘1.1.9’ ** package ‘glmnetUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmnetUtils) begin installing package ‘aorsf’ * installing *source* package ‘diffusionMap’ ... ** this is package ‘diffusionMap’ version ‘1.2.0’ ** package ‘diffusionMap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffusionMap) begin installing package ‘censored’ * installing *source* package ‘stacks’ ... ** this is package ‘stacks’ version ‘1.1.1’ ** package ‘stacks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stacks) begin installing package ‘sparsediscrim’ * installing *source* package ‘torchvision’ ... ** this is package ‘torchvision’ version ‘0.8.0’ ** package ‘torchvision’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (torchvision) begin installing package ‘cmaes’ * installing *source* package ‘nvmix’ ... ** this is package ‘nvmix’ version ‘0.1-2’ ** package ‘nvmix’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpo7DPi9/R.INSTALL10010c57171faf/nvmix/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c eval_densmix_integrand.c -o eval_densmix_integrand.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c eval_gdensmix_integrand.c -o eval_gdensmix_integrand.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c eval_nvmix_integral.c -o eval_nvmix_integral.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logsumexp2.c -o logsumexp2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c precond.c -o precond.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o nvmix.so eval_densmix_integrand.o eval_gdensmix_integrand.o eval_nvmix_integral.o init.o logsumexp2.o precond.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpo7DPi9/R.INSTALL10010c57171faf/nvmix/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nvmix/00new/nvmix/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nvmix) begin installing package ‘AmesHousing’ * installing *source* package ‘luz’ ... ** this is package ‘luz’ version ‘0.5.1’ ** package ‘luz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (luz) begin installing package ‘ICEbox’ * installing *source* package ‘embed’ ... ** this is package ‘embed’ version ‘1.2.2’ ** package ‘embed’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (embed) begin installing package ‘FOCI’ * installing *source* package ‘modelStudio’ ... ** this is package ‘modelStudio’ version ‘3.1.2’ ** package ‘modelStudio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modelStudio) begin installing package ‘JOUSBoost’ * installing *source* package ‘pcaL1’ ... ** this is package ‘pcaL1’ version ‘1.5.9’ ** package ‘pcaL1’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-15 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc-15 accepts -g... yes checking for gcc-15 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc-15 -E ./configure: line 2996: -n: command not found checking for pkg-config... /usr/bin/pkg-config configure: set compile and link flags according to pkg-config configure: compile flags are -I/usr/include/coin configure: link flags are -lClpSolver -lClp -lCoinUtils -lbz2 -lz -llapack -lblas -lm checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking stdbool.h usability... yes checking stdbool.h presence... yes checking for stdbool.h... yes checking for Clp_C_Interface.h... yes checking for library containing Clp_newModel... none required checking for library containing Clp_setRowName... none required configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXtlJCL/R.INSTALL1007c91140e81d/pcaL1/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pca.c -o l1pca.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pca_R.c -o l1pca_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pcahp.c -o l1pcahp.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pcahp_R.c -o l1pcahp_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pcastar.c -o l1pcastar.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1pcastar_R.c -o l1pcastar_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1projection.c -o l1projection.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c l1projection_R.c -o l1projection_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pcal1.c -o pcal1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pcal1_R.c -o pcal1_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pcalp.c -o pcalp.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pcalp_R.c -o pcalp_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sharpel1pca.c -o sharpel1pca.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sharpel1pca_R.c -o sharpel1pca_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sharpel1rs.c -o sharpel1rs.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sharpel1rs_R.c -o sharpel1rs_R.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sparsel1pca.c -o sparsel1pca.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/coin -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sparsel1pca_R.c -o sparsel1pca_R.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o pcaL1.so init.o l1pca.o l1pca_R.o l1pcahp.o l1pcahp_R.o l1pcastar.o l1pcastar_R.o l1projection.o l1projection_R.o pcal1.o pcal1_R.o pcalp.o pcalp_R.o sharpel1pca.o sharpel1pca_R.o sharpel1rs.o sharpel1rs_R.o sparsel1pca.o sparsel1pca_R.o -lClpSolver -lClp -lCoinUtils -lbz2 -lz -llapack -lblas -lm -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXtlJCL/R.INSTALL1007c91140e81d/pcaL1/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pcaL1/00new/pcaL1/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pcaL1) begin installing package ‘polyreg’ * installing *source* package ‘cmaes’ ... ** this is package ‘cmaes’ version ‘1.0-12’ ** package ‘cmaes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cmaes) begin installing package ‘autoimage’ * installing *source* package ‘narray’ ... ** this is package ‘narray’ version ‘0.5.2’ ** package ‘narray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVeJdT1/R.INSTALL1000fe332d583f/narray/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c stack.cpp -o stack.o stack.cpp: In instantiation of ‘Rcpp::Vector cpp_stack_impl(Rcpp::List, int, Rcpp::Vector, bool) [with int RTYPE = 10; Rcpp::List = Rcpp::Vector<19>]’: stack.cpp:143:51: required from here 143 | case LGLSXP: return cpp_stack_impl(array_list, along, as(fill), ovr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ stack.cpp:19:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 19 | if (along == dim.size()+1) { // along introduces new dimension | ~~~~~~^~~~~~~~~~~~~~~ stack.cpp:34:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int d=0; d >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 66 | if (a2r[ai].size() != rdim.size()) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ stack.cpp:70:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for (int i=0; i > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int d=0; d cpp_stack_impl(Rcpp::List, int, Rcpp::Vector, bool) [with int RTYPE = 13; Rcpp::List = Rcpp::Vector<19>]’: stack.cpp:144:51: required from here 144 | case INTSXP: return cpp_stack_impl(array_list, along, as(fill), ovr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ stack.cpp:19:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 19 | if (along == dim.size()+1) { // along introduces new dimension | ~~~~~~^~~~~~~~~~~~~~~ stack.cpp:34:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int d=0; d >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 66 | if (a2r[ai].size() != rdim.size()) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ stack.cpp:70:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for (int i=0; i > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int d=0; d cpp_stack_impl(Rcpp::List, int, Rcpp::Vector, bool) [with int RTYPE = 14; Rcpp::List = Rcpp::Vector<19>]’: stack.cpp:145:53: required from here 145 | case REALSXP: return cpp_stack_impl(array_list, along, as(fill), ovr); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ stack.cpp:19:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 19 | if (along == dim.size()+1) { // along introduces new dimension | ~~~~~~^~~~~~~~~~~~~~~ stack.cpp:34:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int d=0; d >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 66 | if (a2r[ai].size() != rdim.size()) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ stack.cpp:70:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for (int i=0; i > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int d=0; d cpp_stack_impl(Rcpp::List, int, Rcpp::Vector, bool) [with int RTYPE = 15; Rcpp::List = Rcpp::Vector<19>]’: stack.cpp:146:53: required from here 146 | case CPLXSXP: return cpp_stack_impl(array_list, along, as(fill), ovr); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ stack.cpp:19:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 19 | if (along == dim.size()+1) { // along introduces new dimension | ~~~~~~^~~~~~~~~~~~~~~ stack.cpp:34:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int d=0; d >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 66 | if (a2r[ai].size() != rdim.size()) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ stack.cpp:70:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for (int i=0; i > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int d=0; d cpp_stack_impl(Rcpp::List, int, Rcpp::Vector, bool) [with int RTYPE = 16; Rcpp::List = Rcpp::Vector<19>]’: stack.cpp:147:51: required from here 147 | case STRSXP: return cpp_stack_impl(array_list, along, as(fill), ovr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ stack.cpp:19:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 19 | if (along == dim.size()+1) { // along introduces new dimension | ~~~~~~^~~~~~~~~~~~~~~ stack.cpp:34:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 34 | for (int d=0; d >::size_type’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 66 | if (a2r[ai].size() != rdim.size()) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ stack.cpp:70:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for (int i=0; i > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int d=0; d Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>’ 50 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 1>’ 148 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 222 | class Map, Options, StrideType> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix’ 32 | class MappedSparseMatrix | ^~~~~~~~~~~~~~~~~~ lime_types.h:5:15: required from here 5 | typedef MSpMat::InnerIterator InIterMat; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseVector.h:64:7: required from ‘class Eigen::SparseVector’ 64 | class SparseVector | ^~~~~~~~~~~~ lime_types.h:7:14: required from here 7 | typedef SpVec::InnerIterator InIterVec; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cosine_similarity.cpp -o cosine_similarity.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from cosine_similarity.cpp:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>’ 50 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 1>’ 148 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 222 | class Map, Options, StrideType> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix’ 32 | class MappedSparseMatrix | ^~~~~~~~~~~~~~~~~~ lime_types.h:5:15: required from here 5 | typedef MSpMat::InnerIterator InIterMat; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseVector.h:64:7: required from ‘class Eigen::SparseVector’ 64 | class SparseVector | ^~~~~~~~~~~~ lime_types.h:7:14: required from here 7 | typedef SpVec::InnerIterator InIterVec; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c permutations.cpp -o permutations.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c slic.cpp -o slic.o slic.cpp: In function ‘Rcpp::IntegerMatrix slic(Rcpp::RawMatrix, Rcpp::RawMatrix, Rcpp::RawMatrix, int, double, int)’: slic.cpp:152:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int j = 0; j < centers.size(); j++) { | ~~^~~~~~~~~~~~~~~~ slic.cpp:183:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 183 | for (int j = 0; j < centers.size(); j++) { | ~~^~~~~~~~~~~~~~~~ g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lime.so RcppExports.o cosine_similarity.o permutations.o slic.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVS22AI/R.INSTALL100e9d2c94bbf2/lime/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-lime/00new/lime/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lime) * installing *source* package ‘arulesViz’ ... ** this is package ‘arulesViz’ version ‘1.5.4’ ** package ‘arulesViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arulesViz) * installing *source* package ‘paws.developer.tools’ ... ** this is package ‘paws.developer.tools’ version ‘0.9.0’ ** package ‘paws.developer.tools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.developer.tools) * installing *source* package ‘partools’ ... ** this is package ‘partools’ version ‘1.1.7’ ** package ‘partools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (partools) begin installing package ‘cdparcoord’ * installing *source* package ‘toweranNA’ ... ** this is package ‘toweranNA’ version ‘0.1.0’ ** package ‘toweranNA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toweranNA) * installing *source* package ‘spdep’ ... ** this is package ‘spdep’ version ‘1.4-2’ ** package ‘spdep’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTI5f6J/R.INSTALL101d156be85934/spdep/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c card.c -o card.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dfs_ncomp.c -o dfs_ncomp.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dnn.c -o dnn.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gabriel.c -o gabriel.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gearyw.c -o gearyw.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gsymtest.c -o gsymtest.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c insiders.c -o insiders.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jc.c -o jc.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c knn.c -o knn.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lagw.c -o lagw.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c listw2sn.c -o listw2sn.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nbdists.c -o nbdists.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c perm_no_replace.c -o perm_no_replace.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c polypoly.c -o polypoly.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c relative.c -o relative.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c skater.c -o skater.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c symtest.c -o symtest.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o spdep.so card.o dfs_ncomp.o dnn.o gabriel.o gearyw.o gsymtest.o init.o insiders.o jc.o knn.o lagw.o listw2sn.o nbdists.o perm_no_replace.o polypoly.o relative.o skater.o symtest.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTI5f6J/R.INSTALL101d156be85934/spdep/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spdep/00new/spdep/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spdep) * installing *source* package ‘reticulate’ ... ** this is package ‘reticulate’ version ‘1.45.0’ ** package ‘reticulate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpa9wnox/R.INSTALL10160c68fb9402/reticulate/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c event_loop.cpp -o event_loop.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c libpython.cpp -o libpython.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c output.cpp -o output.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pending_py_calls_notifier.cpp -o pending_py_calls_notifier.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c python.cpp -o python.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c readline.cpp -o readline.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c signals.cpp -o signals.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o reticulate.so RcppExports.o event_loop.o libpython.o output.o pending_py_calls_notifier.o python.o readline.o signals.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpa9wnox/R.INSTALL10160c68fb9402/reticulate/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-reticulate/00new/reticulate/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reticulate) begin installing package ‘tfdatasets’ begin installing package ‘tfestimators’ begin installing package ‘onnx’ begin installing package ‘keras’ * installing *source* package ‘clustermq’ ... ** this is package ‘clustermq’ version ‘0.9.9’ ** package ‘clustermq’ successfully unpacked and MD5 sums checked ** using staged installation * system has libzmq -> linking system library * libzmq without DRAFT API found -> disabling crash monitor feature ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnY5hLP/R.INSTALL100b6d689ebe9c/clustermq/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQMaster.cpp -o CMQMaster.o In file included from CMQMaster.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQProxy.cpp -o CMQProxy.o In file included from CMQProxy.h:3, from CMQProxy.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ CMQProxy.h: In member function ‘SEXPREC* CMQProxy::proxy_receive_cmd()’: CMQProxy.h:54:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 54 | auto n = recv_multipart(to_master, std::back_inserter(msgs)); | ^ CMQProxy.h:55:14: warning: unused variable ‘status’ [-Wunused-variable] 55 | auto status = msg2wlife_t(msgs[1]); | ^~~~~~ CMQProxy.h: In member function ‘bool CMQProxy::process_one()’: CMQProxy.h:116:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 139 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from bsts.cc:22: create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bsts.cc: In function ‘SEXPREC* analysis_common_r_bsts_one_step_prediction_errors_(SEXP, SEXP, SEXP)’: bsts.cc:211:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 211 | for (int i = 0; i < cutpoints.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ bsts.cc:217:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int i = 0; i < futures.size(); ++i) { | ~~^~~~~~~~~~~~~~~~ bsts.cc:223:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 223 | for (int i = 0; i < prediction_errors.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bsts_init.cc -o bsts_init.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c create_dynamic_intercept_state_model.cpp -o create_dynamic_intercept_state_model.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from create_state_model.h:24, from create_dynamic_intercept_state_model.h:21, from create_dynamic_intercept_state_model.cpp:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from create_state_model.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from create_dynamic_intercept_state_model.cpp:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ create_dynamic_intercept_state_model.cpp: In member function ‘BOOM::Ptr BOOM::bsts::DynamicInterceptStateModelFactory::CreateStateModel(BOOM::DynamicInterceptRegressionModel*, SEXP, const std::string&)’: create_dynamic_intercept_state_model.cpp:86:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int i = 0; i < class_info.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:29, from create_dynamic_intercept_state_model.cpp:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/RegressionModel.hpp:33, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionStateModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:26: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp: In instantiation of ‘void BOOM::SufstatDataPolicy::refresh_suf() [with D = BOOM::UnivData; S = BOOM::GaussianSuf]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:145:5: required from ‘void BOOM::SufstatDataPolicy::set_data(const DatasetType&) [with D = BOOM::UnivData; S = BOOM::GaussianSuf; DatasetType = std::vector > >]’ 145 | refresh_suf(); | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:143:8: required from here 143 | void SufstatDataPolicy::set_data(const DatasetType &d) { | ^~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:83:24: warning: comparison of integer expressions of different signedness: ‘BOOM::uint’ {aka ‘long int’} and ‘std::vector > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 83 | for (uint i = 0; i < d.size(); ++i) suf_->update(d[i]); | ~~^~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c create_shared_state_model.cpp -o create_shared_state_model.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from create_state_model.h:24, from create_shared_state_model.h:21, from create_shared_state_model.cpp:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from create_state_model.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:21, from create_shared_state_model.h:24: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘bool BOOM::StateSpaceUtils::SharedStateModelManager::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here 214 | return state_manager_.has_series_specific_state(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 47 | for (int i = 0; i < proxy_models_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘void BOOM::StateSpaceUtils::SharedStateModelManager::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here 380 | state_manager_.observe_time_dimension(t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int m = 0; m < proxy_models_.size(); ++m) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:30: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c create_state_model.cpp -o create_state_model.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from create_state_model.h:24, from create_state_model.cpp:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from create_state_model.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from create_state_model.cpp:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/PosteriorSamplers/DynamicRegressionArPosteriorSampler.hpp:23, from create_state_model.cpp:42: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp: In member function ‘virtual BOOM::SparseVector BOOM::DynamicRegressionArStateModel::observation_matrix(int) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp:121:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 121 | if (t >= expanded_predictors_.size()) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/PriorPolicy.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GammaModel.hpp:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ChisqModel.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/PosteriorSampler.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/PosteriorSampler.hpp:83:20: warning: ‘virtual double BOOM::PosteriorSampler::log_prior_density(const BOOM::ConstVectorView&) const’ was hidden [-Woverloaded-virtual=] 83 | virtual double log_prior_density(const ConstVectorView ¶meters) const; | ^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/PosteriorSamplers/DynamicRegressionArPosteriorSampler.hpp:24: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/TimeSeries/PosteriorSamplers/ArPosteriorSampler.hpp:65:12: note: by ‘virtual double BOOM::ArPosteriorSampler::log_prior_density(const BOOM::Model&) const’ 65 | double log_prior_density(const Model &model) const override; | ^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/HierarchicalRegressionHolidayStateModel.hpp:31, from create_state_model.cpp:48: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function ‘const BOOM::Holiday* BOOM::RegressionHolidayBaseImpl::holiday(int) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:69:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 69 | return (t >= 0 && t < holidays_.size()) ? holidays_[t].get() : nullptr; | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function ‘int BOOM::RegressionHolidayBaseImpl::which_holiday(int) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:111:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 111 | return (t >= 0 && t < which_holiday_.size()) ? which_holiday_[t] : -1; | ~~^~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function ‘int BOOM::RegressionHolidayBaseImpl::which_day(int) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:121:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 121 | return (t >= 0 && t < which_day_.size()) ? which_day_[t] : -1; | ~~^~~~~~~~~~~~~~~~~~~ create_state_model.cpp: In member function ‘BOOM::Ptr BOOM::bsts::StateModelFactory::CreateStateModel(BOOM::ScalarStateSpaceModelBase*, SEXP, const std::string&)’: create_state_model.cpp:191:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < class_info.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:29, from create_state_model.cpp:40: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GammaModel.hpp:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp: In instantiation of ‘void BOOM::SufstatDataPolicy::refresh_suf() [with D = BOOM::UnivData; S = BOOM::GaussianSuf]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:145:5: required from ‘void BOOM::SufstatDataPolicy::set_data(const DatasetType&) [with D = BOOM::UnivData; S = BOOM::GaussianSuf; DatasetType = std::vector > >]’ 145 | refresh_suf(); | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:143:8: required from here 143 | void SufstatDataPolicy::set_data(const DatasetType &d) { | ^~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Policies/SufstatDataPolicy.hpp:83:24: warning: comparison of integer expressions of different signedness: ‘BOOM::uint’ {aka ‘long int’} and ‘std::vector > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 83 | for (uint i = 0; i < d.size(); ++i) suf_->update(d[i]); | ~~^~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dirm.cc -o dirm.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from dirm.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ZeroMeanGaussianModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionStateModel.hpp:28, from dynamic_intercept_model_manager.h:22, from dirm.cc:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dynamic_intercept_model_manager.cc -o dynamic_intercept_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from dynamic_intercept_model_manager.h:20, from dynamic_intercept_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ZeroMeanGaussianModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionStateModel.hpp:28, from dynamic_intercept_model_manager.h:22: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from create_dynamic_intercept_state_model.h:21, from dynamic_intercept_model_manager.cc:18: create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dynamic_intercept_model_manager.cc: In member function ‘virtual void BOOM::bsts::DynamicInterceptModelManager::AddDataFromList(SEXP)’: dynamic_intercept_model_manager.cc:213:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | while(observation_number < response.size() && | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c get_date_ranges.cc -o get_date_ranges.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from create_state_model.h:24, from get_date_ranges.cc:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ get_date_ranges.cc: In function ‘SEXPREC* analysis_common_r_get_date_ranges_(SEXP, SEXP)’: get_date_ranges.cc:62:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 62 | for (int i = 0; i < dates.size(); ++i) { | ~~^~~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mbsts.cc -o mbsts.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from mbsts.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from mbsts.cc:23: create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:21, from create_shared_state_model.h:24, from mbsts.cc:24: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘bool BOOM::StateSpaceUtils::SharedStateModelManager::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here 214 | return state_manager_.has_series_specific_state(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 47 | for (int i = 0; i < proxy_models_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘void BOOM::StateSpaceUtils::SharedStateModelManager::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here 380 | state_manager_.observe_time_dimension(t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int m = 0; m < proxy_models_.size(); ++m) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mixed_frequency.cc -o mixed_frequency.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from create_state_model.h:24, from mixed_frequency.cc:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from create_state_model.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from mixed_frequency.cc:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ mixed_frequency.cc: In function ‘void {anonymous}::TranscribeResponseData(const BOOM::Ptr&, const BOOM::Ptr&, BOOM::RErrorReporter*)’: mixed_frequency.cc:280:19: warning: comparison of integer expressions of different signedness: ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 280 | if (data.size() != imputed_data.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ mixed_frequency.cc: In function ‘std::vector, std::allocator > > {anonymous}::ComputeTrainingData(SEXP, SEXP, SEXP, SEXP, SEXP)’: mixed_frequency.cc:319:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 319 | && (which_month < target_series.size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c model_manager.cc -o model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from model_manager.cc:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ZeroMeanGaussianModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModel.hpp:26, from state_space_gaussian_model_manager.h:23, from model_manager.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from model_manager.cc:28: create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from model_manager.cc:36: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp: In member function ‘virtual BOOM::SparseVector BOOM::DynamicRegressionArStateModel::observation_matrix(int) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp:121:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 121 | if (t >= expanded_predictors_.size()) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26, from multivariate_gaussian_model_manager.h:25, from model_manager.cc:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘bool BOOM::StateSpaceUtils::SharedStateModelManager::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here 214 | return state_manager_.has_series_specific_state(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 47 | for (int i = 0; i < proxy_models_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘void BOOM::StateSpaceUtils::SharedStateModelManager::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here 380 | state_manager_.observe_time_dimension(t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int m = 0; m < proxy_models_.size(); ++m) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c multivariate_gaussian_model_manager.cc -o multivariate_gaussian_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from utils.h:24, from multivariate_gaussian_model_manager.cc:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from utils.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:21, from multivariate_gaussian_model_manager.h:25, from multivariate_gaussian_model_manager.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from create_shared_state_model.h:21, from multivariate_gaussian_model_manager.cc:21: create_state_model.h: In member function ‘void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()’: create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘bool BOOM::StateSpaceUtils::SharedStateModelManager::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here 214 | return state_manager_.has_series_specific_state(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 47 | for (int i = 0; i < proxy_models_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of ‘void BOOM::StateSpaceUtils::SharedStateModelManager::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here 380 | state_manager_.observe_time_dimension(t); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int m = 0; m < proxy_models_.size(); ++m) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from utils.h:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c state_space_gaussian_model_manager.cc -o state_space_gaussian_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from state_space_gaussian_model_manager.h:20, from state_space_gaussian_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ZeroMeanGaussianModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModel.hpp:26, from state_space_gaussian_model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ state_space_gaussian_model_manager.cc: In member function ‘void BOOM::bsts::StateSpaceModelManager::AddData(const BOOM::Vector&, const std::vector&)’: state_space_gaussian_model_manager.cc:142:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 142 | for (int i = 0; i < response.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_gaussian_model_manager.cc: In member function ‘virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)’: state_space_gaussian_model_manager.cc:177:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 177 | for (int i = cutpoint + 1; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c state_space_logit_model_manager.cc -o state_space_logit_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from state_space_logit_model_manager.h:20, from state_space_logit_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from state_space_logit_model_manager.cc:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.hpp:23, from state_space_logit_model_manager.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_logit_model_manager.cc: In member function ‘virtual BOOM::StateSpaceLogitModel* BOOM::bsts::StateSpaceLogitModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)’: state_space_logit_model_manager.cc:66:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int i = 0; i < successes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ state_space_logit_model_manager.cc: In member function ‘void BOOM::bsts::StateSpaceLogitModelManager::AddData(const BOOM::Vector&, const BOOM::Vector&, const BOOM::Matrix&, const std::vector&)’: state_space_logit_model_manager.cc:202:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 202 | for (int i = 0; i < successes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c state_space_poisson_model_manager.cc -o state_space_poisson_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from state_space_poisson_model_manager.h:20, from state_space_poisson_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from state_space_poisson_model_manager.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionAuxMixSampler.hpp:30, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionSpikeSlabSampler.hpp:24, from state_space_poisson_model_manager.cc:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_poisson_model_manager.cc: In member function ‘virtual BOOM::StateSpacePoissonModel* BOOM::bsts::StateSpacePoissonModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)’: state_space_poisson_model_manager.cc:85:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 85 | for (int i = 0; i < counts.size(); ++i) { | ~~^~~~~~~~~~~~~~~ state_space_poisson_model_manager.cc: In member function ‘void BOOM::bsts::StateSpacePoissonModelManager::AddData(const BOOM::Vector&, const BOOM::Vector&, const BOOM::Matrix&, const std::vector&)’: state_space_poisson_model_manager.cc:210:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i = 0; i < counts.size(); ++i) { | ~~^~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c state_space_regression_model_manager.cc -o state_space_regression_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from state_space_gaussian_model_manager.h:20, from state_space_regression_model_manager.h:20, from state_space_regression_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ZeroMeanGaussianModel.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModel.hpp:26, from state_space_gaussian_model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ state_space_regression_model_manager.cc: In member function ‘virtual BOOM::StateSpaceRegressionModel* BOOM::bsts::StateSpaceRegressionModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)’: state_space_regression_model_manager.cc:75:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 75 | for (int i = 0; i < response.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_regression_model_manager.cc: In member function ‘void BOOM::bsts::StateSpaceRegressionModelManager::AddData(const BOOM::Vector&, const BOOM::Matrix&, const std::vector&)’: state_space_regression_model_manager.cc:233:28: warning: comparison of integer expressions of different signedness: ‘BOOM::uint’ {aka ‘long int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 233 | if (nrow(predictors) != response.size() | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ state_space_regression_model_manager.cc:244:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 244 | for (int i = 0; i < response.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_regression_model_manager.cc: In member function ‘virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceRegressionModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)’: state_space_regression_model_manager.cc:296:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int i = cutpoint + 1; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ state_space_regression_model_manager.cc:303:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 303 | for (int i = cutpoint + 1; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c state_space_student_model_manager.cc -o state_space_student_model_manager.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from model_manager.h:22, from state_space_student_model_manager.h:20, from state_space_student_model_manager.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/list_io.hpp:27, from model_manager.h:21: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:232:20: warning: ‘virtual double BOOM::LoglikeModel::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 232 | virtual double log_likelihood() const { | ^~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/IndependentMvnModel.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/r_interface/prior_specification.hpp:26, from state_space_student_model_manager.cc:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/ModelTypes.hpp:332:20: warning: ‘virtual double BOOM::DirichletProcessMixtureComponent::log_likelihood() const’ was hidden [-Woverloaded-virtual=] 332 | virtual double log_likelihood() const = 0; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/GaussianModelBase.hpp:163:19: note: by ‘static double BOOM::GaussianModelBase::log_likelihood(const BOOM::GaussianSuf&, double, double)’ 163 | static double log_likelihood(const GaussianSuf &suf, double mu, | ^~~~~~~~~~~~~~ state_space_student_model_manager.cc: In member function ‘virtual BOOM::StateSpaceStudentRegressionModel* BOOM::bsts::StateSpaceStudentModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)’: state_space_student_model_manager.cc:73:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 73 | for (int i = 0; i < response.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ state_space_student_model_manager.cc: In member function ‘virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceStudentModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)’: state_space_student_model_manager.cc:183:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 183 | for (int i = cutpoint + 1; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ state_space_student_model_manager.cc:190:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | for (int i = cutpoint + 1; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from model_manager.h:23: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c timestamp_info.cc -o timestamp_info.o timestamp_info.cc: In member function ‘void BOOM::bsts::TimestampInfo::UnpackForecastTimestamps(SEXP)’: timestamp_info.cc:54:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int i = 1; i < forecast_timestamps_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cc -o utils.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23, from utils.h:24, from utils.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘BOOM::uint’ {aka ‘long int’} [-Wsign-compare] 1269 | for (size_t i = ncol_; i < lhs.size(); ++i) { | ~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1499 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1508 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1517 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1525 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1536 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1546 | for (int i = 0; i < diagonal_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector >&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1558 | if (dim < diagonal.size()) { | ~~~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function ‘const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 2052 | if (dense_right_.size() != right_.size()) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ utils.cc: In function ‘void BOOM::bsts::DropUnforcedCoefficients(const BOOM::Ptr&, const BOOM::Vector&)’: utils.cc:28:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | for (int i = 0; i < prior_inclusion_probs.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utils.cc: In function ‘std::vector BOOM::bsts::IsObserved(SEXP)’: utils.cc:58:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | for (int i = 0; i < n; ++i) { | ~~^~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28, from utils.h:25: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of ‘void BOOM::MultivariateKalmanFilter::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here 227 | void ensure_size(int time) override { | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 228 | while(nodes_.size() <= time) { | ~~~~~~~~~~~~~~^~~~~~~~ g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bsts.so aggregate_time_series.o bsts.o bsts_init.o create_dynamic_intercept_state_model.o create_shared_state_model.o create_state_model.o dirm.o dynamic_intercept_model_manager.o get_date_ranges.o mbsts.o mixed_frequency.o model_manager.o multivariate_gaussian_model_manager.o state_space_gaussian_model_manager.o state_space_logit_model_manager.o state_space_poisson_model_manager.o state_space_regression_model_manager.o state_space_student_model_manager.o timestamp_info.o utils.o /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/lib/libboom.a -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfkSmYA/R.INSTALL1000c1231bd15c/bsts/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bsts/00new/bsts/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bsts) begin installing package ‘CausalImpact’ * installing *source* package ‘paws.security.identity’ ... ** this is package ‘paws.security.identity’ version ‘0.9.0’ ** package ‘paws.security.identity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.security.identity) * installing *source* package ‘CausalImpact’ ... ** this is package ‘CausalImpact’ version ‘1.4.1’ ** package ‘CausalImpact’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CausalImpact) * installing *source* package ‘paws.machine.learning’ ... ** this is package ‘paws.machine.learning’ version ‘0.9.0’ ** package ‘paws.machine.learning’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.machine.learning) begin installing package ‘smdocker’ * installing *source* package ‘smdocker’ ... ** this is package ‘smdocker’ version ‘0.1.4’ ** package ‘smdocker’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smdocker) * installing *source* package ‘aorsf’ ... ** this is package ‘aorsf’ version ‘0.1.6’ ** package ‘aorsf’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyhqTPV/R.INSTALL100fa974380f1a/aorsf/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c AAA_check_cpp_version.cpp -o AAA_check_cpp_version.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Coxph.cpp -o Coxph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Forest.cpp -o Forest.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestClassification.cpp -o ForestClassification.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestRegression.cpp -o ForestRegression.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestSurvival.cpp -o ForestSurvival.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Tree.cpp -o Tree.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeClassification.cpp -o TreeClassification.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeRegression.cpp -o TreeRegression.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeSurvival.cpp -o TreeSurvival.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c orsf_oop.cpp -o orsf_oop.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utility.cpp -o utility.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o aorsf.so AAA_check_cpp_version.o Coxph.o Forest.o ForestClassification.o ForestRegression.o ForestSurvival.o RcppExports.o Tree.o TreeClassification.o TreeRegression.o TreeSurvival.o orsf_oop.o utility.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyhqTPV/R.INSTALL100fa974380f1a/aorsf/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-aorsf/00new/aorsf/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aorsf) checking keras_2.16.1.tar.gz ... checking ARMALSTM_0.1.0.tar.gz ... checking autokeras_1.0.12.tar.gz ... checking autotab_0.1.3.tar.gz ... checking codacore_0.0.4.tar.gz ... checking codez_1.0.0.tar.gz ... checking cramR_0.1.1.tar.gz ... checking criticality_0.9.3.tar.gz ... checking deepspat_0.3.1.tar.gz ... checking FuncNN_1.0.tar.gz ... checking gnn_0.0-5.tar.gz ... checking imageseg_0.5.0.tar.gz ... checking iSubGen_1.0.4.tar.gz ... checking janus_1.0.0.tar.gz ... checking LDNN_1.10.tar.gz ... checking LilRhino_1.2.2.tar.gz ... checking MantaID_1.0.4.tar.gz ... checking MBMethPred_0.1.4.4.tar.gz ... checking ML2Pvae_1.0.0.1.tar.gz ... checking mnda_1.0.9.tar.gz ... checking neuralGAM_2.0.1.tar.gz ... checking PLEXI_1.0.0.tar.gz ... checking ProcData_0.3.2.tar.gz ... checking processpredictR_0.1.1.tar.gz ... checking roseRF_0.1.0.tar.gz ... checking rTLsDeep_0.0.5.tar.gz ... checking snap_1.1.0.tar.gz ... checking soundClass_0.0.9.2.tar.gz ... checking iml_0.11.4.tar.gz ... checking tfprobability_0.15.2.tar.gz ... checking innsight_0.3.2.tar.gz ... checking mlflow_3.9.0.tar.gz ... checking PhysicalActivity_0.2-4.tar.gz ... checking tfNeuralODE_0.1.0.tar.gz ... checking counterfactuals_1.0.0.tar.gz ... checking TraceAssist_0.1.0.tar.gz ... checking tfaddons_0.10.0.tar.gz ... checking bamlss_1.2-5.tar.gz ... checking pdp_0.8.3.tar.gz ... checking cloudml_0.7.1.tar.gz ... checking bundle_0.1.3.tar.gz ... checking dimRed_0.2.7.tar.gz ... checking mrbin_1.9.4.tar.gz ... checking lime_0.5.4.tar.gz ... checking condvis2_0.1.2.tar.gz ... checking multiRL_0.2.3.tar.gz ... checking TSLSTMplus_1.0.6.tar.gz ... checking tsLSTMx_0.1.0.tar.gz ... checking seriation_1.5.8.tar.gz ... checking transformerForecasting_0.1.0.tar.gz ... checking TSPred_5.1.1.tar.gz ... checking RegimeChange_0.1.1.tar.gz ... checking nn2poly_0.1.3.tar.gz ... checking fastml_0.7.7.tar.gz ... checking qeML_1.1.tar.gz ... checking tfhub_0.8.1.tar.gz ... checking tidylearn_0.1.0.tar.gz ... checking survivalmodels_0.1.191.tar.gz ... checking vetiver_0.2.7.tar.gz ... checking SPORTSCausal_1.0.tar.gz ... checking regtools_1.7.0.tar.gz ... checking drake_7.13.11.tar.gz ... checking PortfolioTesteR_0.1.4.tar.gz ... checking parsnip_1.4.1.tar.gz ... checking vivid_0.3.0.tar.gz ... checking TSLSTM_0.1.0.tar.gz ... checking targets_1.12.0.tar.gz ... Depends: Package: keras Depends: R (>= 3.6) Imports: generics (>= 0.0.1), reticulate (>= 1.31), tensorflow (>= 2.13.0.9000), tfruns (>= 1.0), magrittr, zeallot, glue, methods, R6, rlang Timings: user system elapsed keras 214.664 13.272 234.509 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 4 62 Check results summary: keras ... OK rdepends_ARMALSTM ... OK rdepends_autokeras ... OK rdepends_autotab ... OK rdepends_bamlss ... OK rdepends_bundle ... OK rdepends_cloudml ... OK rdepends_codacore ... OK rdepends_codez ... OK rdepends_condvis2 ... OK rdepends_counterfactuals ... OK rdepends_cramR ... OK rdepends_criticality ... OK rdepends_deepspat ... OK rdepends_dimRed ... OK rdepends_drake ... OK rdepends_fastml ... OK rdepends_FuncNN ... OK rdepends_gnn ... OK rdepends_imageseg ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_iml ... OK rdepends_innsight ... OK rdepends_iSubGen ... OK rdepends_janus ... OK rdepends_LDNN ... OK rdepends_LilRhino ... OK rdepends_lime ... OK rdepends_MantaID ... OK rdepends_MBMethPred ... OK rdepends_ML2Pvae ... OK rdepends_mlflow ... OK rdepends_mnda ... OK rdepends_mrbin ... OK rdepends_multiRL ... OK rdepends_neuralGAM ... OK rdepends_nn2poly ... OK rdepends_parsnip ... OK rdepends_pdp ... OK rdepends_PhysicalActivity ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_PLEXI ... OK rdepends_PortfolioTesteR ... OK rdepends_ProcData ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_processpredictR ... OK rdepends_qeML ... OK rdepends_RegimeChange ... OK rdepends_regtools ... OK rdepends_roseRF ... OK rdepends_rTLsDeep ... OK rdepends_seriation ... OK rdepends_snap ... OK rdepends_soundClass ... OK rdepends_SPORTSCausal ... OK rdepends_survivalmodels ... OK rdepends_targets ... OK rdepends_tfaddons ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_tfhub ... OK rdepends_tfNeuralODE ... OK rdepends_tfprobability ... OK rdepends_tidylearn ... OK rdepends_TraceAssist ... OK rdepends_transformerForecasting ... OK rdepends_TSLSTM ... OK rdepends_TSLSTMplus ... OK rdepends_tsLSTMx ... OK rdepends_TSPred ... OK rdepends_vetiver ... OK rdepends_vivid ... OK Check results changes: Package: codacore Check: CRAN incoming feasibility Old result: NOTE Package: FuncNN Check: CRAN incoming feasibility Old result: NOTE Package: imageseg Check: CRAN incoming feasibility Old result: NOTE Package: iSubGen Check: examples Old result: ERROR New result: OK Package: LDNN Check: CRAN incoming feasibility Old result: NOTE Package: LilRhino Check: CRAN incoming feasibility Old result: NOTE Package: snap Check: CRAN incoming feasibility Old result: NOTE Package: soundClass Check: CRAN incoming feasibility Old result: NOTE Package: SPORTSCausal Check: CRAN incoming feasibility Old result: NOTE Package: TraceAssist Check: CRAN incoming feasibility Old result: NOTE