downloading reverse dependencies ... downloading cmstatr_0.10.0.tar.gz ... ok downloading CryptRndTest_1.2.7.tar.gz ... ok downloading EnviroPRA2_1.0.1.tar.gz ... ok downloading fda.usc_2.2.0.tar.gz ... ok downloading ldamatch_1.0.3.tar.gz ... ok downloading LSDsensitivity_1.3.0.tar.gz ... ok downloading MSCsimtester_1.1.tar.gz ... ok downloading mxnorm_1.0.3.tar.gz ... ok downloading PMCMRplus_1.9.12.tar.gz ... ok downloading WeibullFit_0.1.0.tar.gz ... ok downloading MARVEL_1.4.0.tar.gz ... ok installing dependencies ‘BSgenome.Hsapiens.NCBI.GRCh38’, ‘FAdist’, ‘fossil’, ‘iterpc’, ‘kSamples’, ‘lawstat’, ‘LSDinterface’, ‘LSDirf’, ‘MAST’, ‘mixdist’, ‘NSM3’, ‘wiggleplotr’ also installing the dependency ‘TSdist’ begin installing package ‘TSdist’ begin installing package ‘iterpc’ begin installing package ‘lawstat’ begin installing package ‘LSDirf’ begin installing package ‘fossil’ begin installing package ‘NSM3’ begin installing package ‘FAdist’ begin installing package ‘BSgenome.Hsapiens.NCBI.GRCh38’ begin installing package ‘mixdist’ begin installing package ‘MAST’ begin installing package ‘wiggleplotr’ begin installing package ‘kSamples’ * installing *source* package ‘FAdist’ ... ** this is package ‘FAdist’ version ‘2.4’ ** package ‘FAdist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FAdist) * installing *source* package ‘iterpc’ ... ** this is package ‘iterpc’ version ‘0.4.2’ ** package ‘iterpc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iterpc) * installing *source* package ‘mixdist’ ... ** this is package ‘mixdist’ version ‘0.5-5’ ** package ‘mixdist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mixdist) * installing *source* package ‘LSDirf’ ... ** this is package ‘LSDirf’ version ‘0.1.3’ ** package ‘LSDirf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LSDirf) * installing *source* package ‘fossil’ ... ** this is package ‘fossil’ version ‘0.4.0’ ** package ‘fossil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fossil) * installing *source* package ‘lawstat’ ... ** this is package ‘lawstat’ version ‘3.6’ ** package ‘lawstat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lawstat) * installing *source* package ‘wiggleplotr’ ... ** this is package ‘wiggleplotr’ version ‘1.32.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wiggleplotr) * installing *source* package ‘kSamples’ ... ** this is package ‘kSamples’ version ‘1.2-11’ ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpl2PNJZ/R.INSTALL20ed267ec693b6/kSamples/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c kSamples.c -o kSamples.o kSamples.c: In function ‘adkPVal’: kSamples.c:651:24: warning: unused variable ‘temp’ [-Wunused-variable] 651 | double temp; | ^~~~ kSamples.c:650:24: warning: unused variable ‘randy’ [-Wunused-variable] 650 | double randy; | ^~~~~ kSamples.c:617:13: warning: unused variable ‘index’ [-Wunused-variable] 617 | int index; | ^~~~~ kSamples.c: In function ‘QNpvalue’: kSamples.c:1243:24: warning: unused variable ‘temp’ [-Wunused-variable] 1243 | double temp; | ^~~~ kSamples.c:1242:24: warning: unused variable ‘randy’ [-Wunused-variable] 1242 | double randy; | ^~~~~ kSamples.c:1214:13: warning: unused variable ‘index’ [-Wunused-variable] 1214 | int index; | ^~~~~ kSamples.c:1209:13: warning: unused variable ‘Ri’ [-Wunused-variable] 1209 | int Ri; | ^~ kSamples.c:1208:13: warning: unused variable ‘j’ [-Wunused-variable] 1208 | int j; | ^ kSamples.c: In function ‘SteelTestStat’: kSamples.c:1417:16: warning: unused variable ‘maxR’ [-Wunused-variable] 1417 | double maxR; | ^~~~ kSamples.c: In function ‘Steelpvalue’: kSamples.c:1547:24: warning: unused variable ‘temp’ [-Wunused-variable] 1547 | double temp; | ^~~~ kSamples.c:1546:24: warning: unused variable ‘randy’ [-Wunused-variable] 1546 | double randy; | ^~~~~ kSamples.c:1517:13: warning: unused variable ‘index’ [-Wunused-variable] 1517 | int index; | ^~~~~ kSamples.c:1512:13: warning: unused variable ‘Ri’ [-Wunused-variable] 1512 | int Ri; | ^~ kSamples.c:1511:13: warning: unused variable ‘j’ [-Wunused-variable] 1511 | int j; | ^ kSamples.c: In function ‘SteelVec’: kSamples.c:1985:24: warning: unused variable ‘temp’ [-Wunused-variable] 1985 | double temp; | ^~~~ kSamples.c:1984:24: warning: unused variable ‘randy’ [-Wunused-variable] 1984 | double randy; | ^~~~~ kSamples.c:1964:13: warning: unused variable ‘index’ [-Wunused-variable] 1964 | int index; | ^~~~~ kSamples.c:1958:13: warning: unused variable ‘Ri’ [-Wunused-variable] 1958 | int Ri; | ^~ kSamples.c:1957:13: warning: unused variable ‘j’ [-Wunused-variable] 1957 | int j; | ^ kSamples.c: In function ‘convvec’: kSamples.c:2158:17: warning: unused variable ‘pij’ [-Wunused-variable] 2158 | double xij, pij; | ^~~ kSamples.c:2158:12: warning: unused variable ‘xij’ [-Wunused-variable] 2158 | double xij, pij; | ^~~ kSamples.c:2157:14: warning: unused variable ‘M’ [-Wunused-variable] 2157 | int i,j, M; | ^ kSamples.c: In function ‘JTpvalue’: kSamples.c:2404:24: warning: unused variable ‘temp’ [-Wunused-variable] 2404 | double temp; | ^~~~ kSamples.c:2403:24: warning: unused variable ‘randy’ [-Wunused-variable] 2403 | double randy; | ^~~~~ kSamples.c:2376:13: warning: unused variable ‘index’ [-Wunused-variable] 2376 | int index; | ^~~~~ kSamples.c:2371:13: warning: unused variable ‘Ri’ [-Wunused-variable] 2371 | int Ri; | ^~ kSamples.c:2370:13: warning: unused variable ‘j’ [-Wunused-variable] 2370 | int j; | ^ kSamples.c: At top level: kSamples.c:2235:16: warning: ‘JTvec’ defined but not used [-Wunused-variable] 2235 | static double *JTvec; | ^~~~~ kSamples.c:2232:12: warning: ‘getJTdist’ defined but not used [-Wunused-variable] 2232 | static int getJTdist; | ^~~~~~~~~ kSamples.c:1323:12: warning: ‘getSteeldist’ defined but not used [-Wunused-variable] 1323 | static int getSteeldist; /* logical value to indicate whether | ^~~~~~~~~~~~ kSamples.c:1092:16: warning: ‘QNvec’ defined but not used [-Wunused-variable] 1092 | static double *QNvec; | ^~~~~ kSamples.c:1089:12: warning: ‘getQNdist’ defined but not used [-Wunused-variable] 1089 | static int getQNdist; | ^~~~~~~~~ gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o kSamples.so kSamples.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpl2PNJZ/R.INSTALL20ed267ec693b6/kSamples/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-kSamples/00new/kSamples/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kSamples) * installing *source* package ‘TSdist’ ... ** this is package ‘TSdist’ version ‘3.7.1’ ** package ‘TSdist’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplvmsdB/R.INSTALL20ed177376564c/TSdist/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c EDR.c -o EDR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c EDRnw.c -o EDRnw.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ERP.c -o ERP.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ERPnw.c -o ERPnw.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c LCSS.c -o LCSS.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c LCSSnw.c -o LCSSnw.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o TSdist.so EDR.o EDRnw.o ERP.o ERPnw.o LCSS.o LCSSnw.o registerDynamicSymbol.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplvmsdB/R.INSTALL20ed177376564c/TSdist/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TSdist/00new/TSdist/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TSdist) begin installing package ‘LSDinterface’ * installing *source* package ‘LSDinterface’ ... ** this is package ‘LSDinterface’ version ‘1.2.2’ ** package ‘LSDinterface’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LSDinterface) * installing *source* package ‘NSM3’ ... ** this is package ‘NSM3’ version ‘1.20’ ** package ‘NSM3’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKrhTVt/R.INSTALL20ed18501ade18/NSM3/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ansari.c -o ansari.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ks.c -o ks.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o NSM3.so ansari.o ks.o registerDynamicSymbol.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKrhTVt/R.INSTALL20ed18501ade18/NSM3/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-NSM3/00new/NSM3/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NSM3) * installing *source* package ‘MAST’ ... ** this is package ‘MAST’ version ‘1.33.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MAST) * installing *source* package ‘BSgenome.Hsapiens.NCBI.GRCh38’ ... ** this is package ‘BSgenome.Hsapiens.NCBI.GRCh38’ version ‘1.3.1000’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BSgenome.Hsapiens.NCBI.GRCh38) checking kSamples_1.2-11.tar.gz ... checking cmstatr_0.10.0.tar.gz ... checking CryptRndTest_1.2.7.tar.gz ... checking EnviroPRA2_1.0.1.tar.gz ... checking fda.usc_2.2.0.tar.gz ... checking ldamatch_1.0.3.tar.gz ... checking LSDsensitivity_1.3.0.tar.gz ... checking MSCsimtester_1.1.tar.gz ... checking mxnorm_1.0.3.tar.gz ... checking PMCMRplus_1.9.12.tar.gz ... checking WeibullFit_0.1.0.tar.gz ... checking MARVEL_1.4.0.tar.gz ... Depends: Package: kSamples Depends: SuppDists Imports: methods, graphics, stats Timings: user system elapsed kSamples 27.314 3.21 30.779 Results: Check status summary: ERROR NOTE OK Source packages 0 0 1 Reverse depends 1 2 8 Check results summary: kSamples ... OK rdepends_cmstatr ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_CryptRndTest ... OK rdepends_EnviroPRA2 ... OK rdepends_fda.usc ... OK rdepends_ldamatch ... OK rdepends_LSDsensitivity ... OK rdepends_MARVEL ... OK rdepends_MSCsimtester ... OK rdepends_mxnorm ... OK rdepends_PMCMRplus ... ERROR * checking examples ... [8s/8s] ERROR rdepends_WeibullFit ... NOTE * checking Rd files ... [0s/0s] NOTE Check results changes: Package: CryptRndTest Check: CRAN incoming feasibility Old result: NOTE Package: PMCMRplus Check: examples New result: ERROR