* using log directory 'd:/RCompile/CRANincoming/R-devel/juicr.Rcheck'
* using R Under development (unstable) (2026-02-16 r89426 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-02-18 18:10:29 UTC
* checking for file 'juicr/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'juicr' version '0.2'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [12s] NOTE
Maintainer: 'Marc J. Lajeunesse <lajeunesse@usf.edu>'

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid URLs:
  URL: http://cran.r-project.org/web/packages/juicr/index.html
    From: inst/doc/juicr_basic_vignette_v0.1.pdf
    Status: 200
    Message: OK
    CRAN URL not in canonical form
  URL: http://lajeunesse.myweb.usf.edu/ https://github.com/mjlajeunesse/ https://www.youtube.com/c/LajeunesseLab/
    From: man/juicr-package.Rd
    Status: Error
    Message: URL using bad/illegal format or missing URL:
      URL rejected: Malformed input to a URL function
    URL contains spaces
  URL: http://www.r-project.org/
    From: inst/doc/juicr_basic_vignette_v0.1.pdf
    Status: 200
    Message: OK
    R-project URL not in canonical form
  URL: http://xquartz.macosforge.org/landing/ (moved to https://www.xquartz.org/)
    From: inst/doc/juicr_basic_vignette_v0.1.pdf
    Status: 301
    Message: Moved Permanently
The canonical URL of the CRAN page for a package is 
  https://CRAN.R-project.org/package=pkgname
For content that is 'Moved Permanently', please change http to https,
add trailing slashes, or replace the old by the new URL.
  Spaces in an http[s] URL should probably be replaced by %20
  Canonical www.R-project.org URLs use https.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'juicr' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... [20s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 NOTE