downloading reverse dependencies ... downloading jsmodule_1.5.1.tar.gz ... ok installing dependencies ‘epiDisplay’, ‘forestploter’, ‘jskm’, ‘jstable’, ‘shinycustomloader’, ‘survIDINRI’, ‘timeROC’ also installing the dependency ‘survC1’ begin installing package ‘jstable’ begin installing package ‘survC1’ begin installing package ‘jskm’ begin installing package ‘shinycustomloader’ begin installing package ‘epiDisplay’ begin installing package ‘timeROC’ begin installing package ‘forestploter’ * installing *source* package ‘shinycustomloader’ ... ** package ‘shinycustomloader’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinycustomloader) * installing *source* package ‘forestploter’ ... ** package ‘forestploter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestploter) * installing *source* package ‘survC1’ ... ** package ‘survC1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpofdiUe/R.INSTALL387f2265c5a76/survC1/src' gfortran-13 -fpic -g -O2 -Wall -mtune=native -c husurvC1v1.f -o husurvC1v1.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survC1_init.c -o survC1_init.o gcc-13 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o survC1.so husurvC1v1.o survC1_init.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpofdiUe/R.INSTALL387f2265c5a76/survC1/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-survC1/00new/survC1/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survC1) begin installing package ‘survIDINRI’ * installing *source* package ‘timeROC’ ... ** package ‘timeROC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timeROC) * installing *source* package ‘jskm’ ... ** package ‘jskm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jskm) * installing *source* package ‘survIDINRI’ ... ** package ‘survIDINRI’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpy6t3xv/R.INSTALL388f58f0fe63/survIDINRI/src' gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survIDINRI_init.c -o survIDINRI_init.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c unoecdfv1.f -o unoecdfv1.o unoecdfv1.f:7:72: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1 Warning: Line truncated at (1) [-Wline-truncation] unoecdfv1.f:13:17: 13 | TMP2=TMP2+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:15:20: 15 | TMP1=TMP1+weight(i) | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] unoecdfv1.f:7:72: 7 | double precision cutoff(nc), OUTECDF(nc), score(n), weight(n), TMP1, TMP2 | 1 Warning: Unused variable ‘tmp’ declared at (1) [-Wunused-variable] gcc-13 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o survIDINRI.so survIDINRI_init.o unoecdfv1.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpy6t3xv/R.INSTALL388f58f0fe63/survIDINRI/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-survIDINRI/00new/survIDINRI/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survIDINRI) * installing *source* package ‘epiDisplay’ ... ** package ‘epiDisplay’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (epiDisplay) * installing *source* package ‘jstable’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: wrong number of arguments to 'exp' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jstable) checking jstable_1.1.7.tar.gz ... checking jsmodule_1.5.1.tar.gz ... Depends: Package: jstable Depends: R (>= 3.4.0) Imports: geepack, lme4, stats, data.table, labelled, tableone, coxme, survival (>= 3.0.0), survey, methods, dplyr, purrr, magrittr, tibble Timings: user system elapsed jstable 93.525 7.59 101.974 Results: Check status summary: OK Source packages 1 Reverse depends 1 Check results summary: jstable ... OK rdepends_jsmodule ... OK