R Under development (unstable) (2024-09-15 r87152 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(jackstraw) > > test_check("jackstraw") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1122 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-jackstraw.R:106:9'): pip works ───────────────────────────────── Error in `smooth.spline(lambda, pi0, df = smooth.df)`: missing or infinite values in inputs are not allowed Backtrace: ▆ 1. ├─testthat::expect_silent(...) at test-jackstraw.R:106:9 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. └─jackstraw::pip(pvalue = pvalue, group = group, verbose = FALSE) 10. └─qvalue::lfdr(pvalue[group == i], ...) 11. └─qvalue::pi0est(p, ...) 12. └─stats::smooth.spline(lambda, pi0, df = smooth.df) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1122 ] Error: Test failures Execution halted