R Under development (unstable) (2025-09-09 r88803 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(itol.toolkit) If you use the itol.toolkit package in published research, please cite: Zhou, T., Xu, K., Zhao, F., Liu, W., Li, L., Hua, Z., & Zhou, X. (2023). itol.toolkit accelerates working with iTOL (Interactive Tree of Life) by an automated generation of annotation files. Bioinformatics, 39(6), btad339. > > test_check("itol.toolkit") Using default color pattern: table2itol Using default color pattern: table2itol Using default color pattern: table2itol Using default color pattern: table2itol Using the first column as id: templates Using the first column as id: templates Using the first column as id: variable Using following column as length parameter: length Using following column as start parameter: start Using following column as end parameter: end Identifying data column to auto setup color parameter Using default color pattern: table2itol Identifying data column to auto setup shape parameter Using default color pattern: table2itol Using default color pattern: table2itol Using default color pattern: table2itol Using the first column as id: template Using the first column as id: template Using default color pattern: table2itol Using default color pattern: table2itol Using the first column as id: template Using the first column as id: template Using default color pattern: table2itol Using the first column as id: template Using following column as subtype parameter: subtype Using the first column as id: template Using following column as subtype parameter: subtype Using the first column as id: V1 [ FAIL 0 | WARN 2 | SKIP 0 | PASS 59 ] [ FAIL 0 | WARN 2 | SKIP 0 | PASS 59 ] > > proc.time() user system elapsed 2.03 0.40 2.42