* using log directory 'd:/RCompile/CRANincoming/R-devel/io.Rcheck' * using R version 4.4.0 alpha (2024-04-02 r86304 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'io/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'io' version '0.3.4' * package encoding: UTF-8 * checking CRAN incoming feasibility ... Note_to_CRAN_maintainers Maintainer: 'David J. H. Shih ' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'io' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... NOTE Mismatches for methods registered for non-generic: qread: function(file, type, ...) qread.grp: function(file, type) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.annotated.matrix: function(x, file, type, quote, sep, row.names, col.names, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.bed: function(x, file, type, track.header, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.character: function(x, file, type, column, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.csv: function(x, file, type, quote, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.dat: function(x, file, type, quote, sep, row.names, col.names, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.data.frame: function(x, file, type, quote, sep, row.names, col.names, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.directory: function(x, file, type, file.types, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.double: function(x, file, type, column, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.flat: function(x, file, type, header, quote, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.h5: function(x, file, type, force, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.hdf5: function(x, file, type, force, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.integer: function(x, file, type, column, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.json: function(x, file, type, append, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.matrix: function(x, file, type, quote, sep, row.names, col.names, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.mtx: function(x, file, type, quote, sep, row.names, col.names, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.numeric: function(x, file, type, column, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.rds: function(x, file, type, deref, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.rnk: function(x, file, type, value.var, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.single: function(x, file, type, column, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.tsv: function(x, file, type, quote, ...) qwrite: function(x, file, type, mkpath, symlink, ...) qwrite.yaml: function(x, file, type, append, ...) See section 'Registering S3 methods' in the 'Writing R Extensions' manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'testthat.R' * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 NOTE