* using log directory 'd:/RCompile/CRANincoming/R-devel/invivoPKfit.Rcheck'
* using R Under development (unstable) (2024-12-19 r87451 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'invivoPKfit/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'invivoPKfit' version '2.0.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [10s] NOTE
Maintainer: 'John Wambaugh <wambaugh.john@epa.gov>'

New submission

Possibly misspelled words in DESCRIPTION:
  HTTK (3:13)
  Vivo (3:31)
  toxicokinetic (16:28)
  vivo (16:23)

The Title field should be in title case. Current version is:
  'Fits HTTK Models to In Vivo PK Data Sets'
In title case that is:
  'Fits HTTK Models to in Vivo PK Data Sets'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'invivoPKfit' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Author field differs from that derived from Authors@R
  Author:    'Caroline Ring, John Wambaugh, Chris Cook, Gilberto Padilla Mercado'
  Authors@R: 'John Wambaugh [aut, cre] (ORCID: <https://orcid.org/0000-0002-4024-534X>), Caroline Ring [aut] (ORCID: <https://orcid.org/0000-0002-0463-1251>), Gilberto Padilla Mercado [aut] (ORCID: <https://orcid.org/0000-0001-5423-1646>), Chris Cook [aut]'

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Apparent methods for exported generics not registered:
  pk_add.pk_facet_data
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [17s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [12s] OK
  Running 'testthat.R' [12s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [12s] OK
* checking PDF version of manual ... [16s] WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! Missing { inserted.
<to be read again> 
                   ^
l.8241 ... m^{-1} + E \right) = P_1^' L L^' P_1}{}
                                                  
! Missing { inserted.
<to be read again> 
                   ^
l.8241 ... m^{-1} + E \right) = P_1^' L L^' P_1}{}
                                                  
! Missing } inserted.
<inserted text> 
                }
l.8241 ... m^{-1} + E \right) = P_1^' L L^' P_1}{}
                                                  
! Missing } inserted.
<inserted text> 
                }
l.8241 ... m^{-1} + E \right) = P_1^' L L^' P_1}{}
                                                  
* checking PDF version of manual without index ... ERROR
* checking HTML version of manual ... [33s] NOTE
Found the following math rendering problems:
hess_sd2.Rd:24: Expected group after '^' in ...E \right) = P_1^' L L^' P_1
* DONE
Status: 1 ERROR, 1 WARNING, 4 NOTEs