# Install Bioconductor dependencies if you don't have them yet if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") bioc_pac <- c( "XVector", "ShortRead", "S4Vectors", "rtracklayer", "Rsubread", "Rsamtools", "limma", "HTSFilter", "edgeR", "Biostrings", "BiocGenerics" ) for (pac in bioc_pac) { if (!requireNamespace(pac, quietly = TRUE)) BiocManager::install(pac) } library("inDAGO") test_that("Shiny app is generated", { expect_s3_class(inDAGO(), "shiny.appobj") })