* using log directory ‘/srv/hornik/tmp/CRAN_pretest/igraphdata.Rcheck’ * using R Under development (unstable) (2024-11-15 r87338) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.1 (1) Debian flang-new version 19.1.1 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘igraphdata/DESCRIPTION’ ... OK * this is package ‘igraphdata’ version ‘1.0.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/125s] NOTE Maintainer: ‘Kirill Müller ’ New maintainer: Kirill Müller Old maintainer(s): Gabor Csardi License components with restrictions and base license permitting such: CC BY-SA 4.0 + file LICENSE File 'LICENSE': This files lists the copyright holders and licenses (if known) of the various data sets in the igraphdata package: Koenigsberg ----------- This data set was collected from Public Domain sources, and it is int the Public Domain itself. Please cite the following publication if you use this data set: Euler, L.: Solutio problematis ad geometriam situs pertinentis. Commentarii academiae scientiarum Petropolitanae, 128-140, 1741. UKfaculty --------- This dataset is licensed under a Creative Commons Attribution-Share Alike 2.0 UK: England & Wales License, see http://creativecommons.org/licenses/by-sa/2.0/uk/ for details. Please cite the following reference if you use this dataset: Nepusz T., Petróczi A., Négyessy L., Bazsó F.: Fuzzy communities and the concept of bridgeness in complex networks. Physical Review E 77:016107, 2008. USairports ---------- The data is from the Research and Innovative Technology Administration, and it is in the Public Domain. enron ----- The data was downloaded from http://www.cis.jhu.edu/~parky/Enron/ Please cite the appropriate paper (see the manual) if you use this data set. foodwebs -------- The data was downloaded from http://vlado.fmf.uni-lj.si/pub/networks/data/bio/foodweb/foodweb.htm Please see the manual page of the data set for the publications that you should cite, if you use some of this data. immuno ------ The data was collected by David Gfeller. Please cite his PhD thesis if you use this data set: D. Gfeller, Simplifying complex networks: from a clustering to a coarse graining strategy, \emph{PhD Thesis EPFL}, no 3888, 2007. http://library.epfl.ch/theses/?nr=3888 karate ------ The data was extracted from the original publication. Please cite: Wayne W. Zachary. An Information Flow Model for Conflict and Fission in Small Groups. Journal of Anthropological Research Vol. 33, No. 4 452-473 kite ---- The data set was extracted from the publication. Please cite: David Krackhardt: Assessing the Political Landscape: Structure, Cognition, and Power in Organizations. Admin. Sci. Quart. 35, 342-369, 1990. macaque ------- This dataset is licensed under a Creative Commons Attribution-Share Alike 2.0 UK: England & Wales License, see http://creativecommons.org/licenses/by-sa/2.0/uk/ for details. Please cite the following reference if you use this dataset: Négyessy L., Nepusz T., Kocsis L., Bazsó F.: Prediction of the main cortical areas and connections involved in the tactile function of the visual cortex by network analysis. European Journal of Neuroscience 23(7):1919–1930, 2006. rfid ---- This data set is licensed under a GPL v3 license. Please cite the following reference if you use this dataset: P. Vanhems, A. Barrat, C. Cattuto, J.-F. Pinton, N. Khanafer, C. Regis, B.-a. Kim, B. Comte, N. Voirin: Estimating potential infection transmission routes in hospital wards using wearable proximity sensors. PloS One 8(9), e73970 306 (2013). yeast ----- The data was downloaded from http://www.nature.com/nature/journal/v417/n6887/suppinfo/nature750.html Please cite the following paper if you use this data set: Comparative assessment of large-scale data sets of protein-protein interactions. Christian von Mering, Roland Krause, Berend Snel, Michael Cornell, Stephen G. Oliver, Stanley Fields and Peer Bork. Nature 417, 399-403 (2002) Found the following (possibly) invalid URLs: URL: http://vlado.fmf.uni-lj.si/pub/networks/data/bio/foodweb/foodweb.htm From: man/foodwebs.Rd Status: Error Message: Connection timed out after 60002 milliseconds * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘igraphdata’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [1s/1s] OK Running ‘testthat.R’ [1s/1s] * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE