test_that("sample_pa() works", { withr::local_seed(20240209) g <- sample_pa(100, m = 2) expect_that(ecount(g), equals(197)) expect_that(vcount(g), equals(100)) expect_true(is_simple(g)) g2 <- sample_pa(100, m = 2, algorithm = "psumtree-multiple") expect_that(ecount(g2), equals(198)) expect_that(vcount(g2), equals(100)) expect_false(is_simple(g2)) g3 <- sample_pa(100, m = 2, algorithm = "bag") expect_that(ecount(g3), equals(198)) expect_that(vcount(g3), equals(100)) expect_false(is_simple(g3)) g4 <- sample_pa(3, out.seq = 0:2, directed = FALSE) expect_equal(degree(g4), rep(2, 3)) g5 <- sample_pa(3, out.dist = rep(2, 1000), directed = FALSE) expect_equal(degree(g5), rep(2, 3)) }) test_that("sample_pa can start from a graph", { withr::local_seed(20231029) g4 <- sample_pa(10, m = 1, algorithm = "bag", start.graph = make_empty_graph(5)) expect_that(ecount(g4), equals(5)) expect_that(vcount(g4), equals(10)) # 0 1 2 3 4 # 24 809 3904 4240 1023 is_degree_zero <- (degree(g4) == 0) expect_true(sum(is_degree_zero) %in% 0:4) # 2 3 4 5 6 7 8 10 # 25 302 1820 2563 3350 1093 816 31 is_degree_one <- (degree(g4) == 1) expect_true(sum(is_degree_one) %in% c(2:8, 10L)) # 0 1 2 3 4 # 879 2271 5289 1532 29 is_degree_two_or_three <- (degree(g4) %in% 2:3) expect_true(sum(is_degree_two_or_three) %in% 0:4) g6 <- sample_pa(10, m = 1, algorithm = "bag", start.graph = make_star(10)) expect_true(graph.isomorphic(g6, make_star(10))) g7 <- sample_pa(10, m = 3, algorithm = "psumtree-multiple", start.graph = make_empty_graph(5) ) expect_that(degree(g7, mode = "out"), equals(c(0, 0, 0, 0, 0, 3, 3, 3, 3, 3))) g8 <- sample_pa(10, m = 3, algorithm = "psumtree-multiple", start.graph = make_star(5) ) expect_that(degree(g8, mode = "out"), equals(c(0, 1, 1, 1, 1, 3, 3, 3, 3, 3))) expect_true(graph.isomorphic(induced_subgraph(g8, 1:5), make_star(5))) g9 <- sample_pa(10, m = 3, algorithm = "psumtree-multiple", start.graph = make_star(10) ) expect_true(graph.isomorphic(g9, make_star(10))) g10 <- sample_pa(10, m = 3, start.graph = make_empty_graph(5)) expect_that(degree(g10, mode = "out"), equals(c(0, 0, 0, 0, 0, 3, 3, 3, 3, 3))) g11 <- sample_pa(10, m = 3, start.graph = make_star(5)) expect_that(degree(g11, mode = "out"), equals(c(0, 1, 1, 1, 1, 3, 3, 3, 3, 3))) expect_true(graph.isomorphic(induced_subgraph(g11, 1:5), make_star(5))) g12 <- sample_pa(10, m = 3, start.graph = make_star(10)) expect_true(graph.isomorphic(g12, make_star(10))) })