test_that("cluster_walktrap works", { g <- make_graph("Zachary") set.seed(42) wc <- cluster_walktrap(g) expect_that(modularity(g, membership(wc)), equals(modularity(wc))) expect_that( as.vector(membership(wc)), equals(c( 1, 1, 2, 1, 5, 5, 5, 1, 2, 2, 5, 1, 1, 2, 3, 3, 5, 1, 3, 1, 3, 1, 3, 4, 4, 4, 3, 4, 2, 3, 2, 2, 3, 3 )) ) expect_that(length(wc), equals(5)) expect_that(sizes(wc), equals(structure( c(9L, 7L, 9L, 4L, 5L), .Dim = 5L, .Dimnames = structure( list(`Community sizes` = c( "1", "2", "3", "4", "5" )), .Names = "Community sizes" ), class = "table" ))) d <- as.dendrogram(wc) expect_that(print(d), prints_text("2 branches.*34 members.*height 33")) expect_that( print(d[[1]]), prints_text("2 branches.*20 members.*height 31") ) expect_that( print(d[[2]]), prints_text("2 branches.*14 members.*height 32") ) m2 <- cut_at(wc, no = 3) expect_that( modularity(g, m2), equals(wc$modularity[length(wc$modularity) - 2], tolerance = 1e-7 ) ) })