* using log directory ‘/srv/hornik/tmp/CRAN/iglu.Rcheck’
* using R Under development (unstable) (2023-10-18 r85349)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 16.0.6 (15)
    GNU Fortran (Debian 13.2.0-4) 13.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘iglu/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘iglu’ version ‘3.5.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/7s] NOTE
Maintainer: ‘Irina Gaynanova <irinagn@umich.edu>’

New maintainer:
  Irina Gaynanova <irinagn@umich.edu>
Old maintainer(s):
  Irina Gaynanova <irinag@stat.tamu.edu>
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘iglu’ can be installed ... [5s/5s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/8s] OK
* checking Rd files ... [0s/0s] NOTE
checkRd: (-1) example_data_5_subject.Rd:19: Lost braces
    19 | Dexcom G4 CGM measurements for 5 subjects with Type II diabetes. These data are part of a larger study sample that consisted of patients with Type 2 diabetes recruited from the general community. To be eligible, patients with Type 2 diabetes, not using insulin therapy and with a glycosylated hemoglobin (HbA$_{1c}$) value at least 6.5%, were screened with an overnight home sleep study using a type 3 sleep monitor. Only patients with an oxygen desaturation index (ODI) of at least 15 events/hr were selected. After the initial screening procedures, eligible patients completed continuous glucose monitoring using the Dexcom G4 sensor, which was placed 6 cm lateral to the umbilicus. Participants were instructed to wear both monitors for 7 days and provide calibration glucose data for the Dexcom sensor twice a day as per manufacturer instructions. Informed consent was obtained from all study participants and the protocol was approved by the local Institutional Review Board of the Johns Hopkins University School of Medicine.
       |                                                                                                                                                                                                                                                                                                                       ^
checkRd: (-1) roc.Rd:42: Lost braces
    42 | where BG_i is the Blood Glucose measurement at time t_i and BG_{i-1} is the
       |                                                                ^
checkRd: (-1) roc.Rd:43: Lost braces
    43 | Blood Glucose measurement at time t_{i-1}. The time difference between the points,
       |                                     ^
checkRd: (-1) roc.Rd:44: Lost braces
    44 | t_i - t_{i-1}, is selectable and set at a default of 15 minutes.
       |         ^
checkRd: (-1) sd_measures.Rd:52: Lost braces
    52 | SD_1 ... SD_n, where SD_i is the standard deviation of the glucose values [X_i, X_{i+1}, ... X_{i+k}]
       |                                                                                   ^
checkRd: (-1) sd_measures.Rd:52: Lost braces
    52 | SD_1 ... SD_n, where SD_i is the standard deviation of the glucose values [X_i, X_{i+1}, ... X_{i+k}]
       |                                                                                                ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [23s/23s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [21s/21s] OK
* checking PDF version of manual ... [4s/4s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs