skip() skip_on_cran() skip_on_ci() o1 <- variants_gene("ENSG00000123374") o2 <- variants_gene("ENSG00000123374", 100000) test_that("genes", { expect_gt(nrow(o1), 0) expect_gt(nrow(o2), nrow(o1)) }) test_that("chrpos", { o <- variants_chrpos("7:105561135-105563135") expect_true(nrow(o) > 1) o <- variants_chrpos("7:105561135") expect_true(nrow(o) == 1) o <- variants_chrpos("nonsense") expect_true(class(o) == "response") }) test_that("rsid", { o <- variants_chrpos("7:105561135-105563135") p <- variants_rsid(o$name) expect_true(all(nrow(o) == nrow(p))) expect_true(all(o$name == p$name)) }) test_that("conversion", { o <- variants_to_rsid(c("rs1205", "7:105561135")) expect_true(length(o) == 2) o <- variants_to_rsid(c("rs234", "7:105561135")) expect_true(length(o) == 1) o <- variants_to_rsid(c("rs234")) expect_true(length(o) == 1) })