* using log directory ‘/srv/hornik/tmp/CRAN/iemiscdata.Rcheck’ * using R Under development (unstable) (2024-06-02 r86665) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.5 (2) Debian flang-new version 18.1.5 (2) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘iemiscdata/DESCRIPTION’ ... OK * this is package ‘iemiscdata’ version ‘1.0.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/8s] NOTE Maintainer: ‘Irucka Embry ’ New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: Embry's (2:15) Irucka (2:8) CRAN repository db overrides: X-CRAN-Comment: Archived on 2024-05-30 as issues were not corrected in time. Suggests or Enhances not in mainstream repositories: iemisc * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: ‘iemisc’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘iemiscdata’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [0s/0s] OK Running ‘spelling.R’ [0s/0s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [22s/22s] ERROR Error(s) in re-building vignettes: ... --- re-building ‘East-Palestine-Ohio_Norfolk-Southern-Train-32N-Cargo_Chemical-Databases.Rmd’ using rmarkdown --- finished re-building ‘East-Palestine-Ohio_Norfolk-Southern-Train-32N-Cargo_Chemical-Databases.Rmd’ --- re-building ‘Mannings-n-examples.Rmd’ using rmarkdown Quitting from lines 161-169 [unnamed-chunk-6] (Mannings-n-examples.Rmd) Error: processing vignette 'Mannings-n-examples.Rmd' failed with diagnostics: could not find function "Manningtrap_critical" --- failed re-building ‘Mannings-n-examples.Rmd’ --- re-building ‘TN_ExceptionalMap.Rmd’ using rmarkdown Quitting from lines 23-90 [unnamed-chunk-1] (TN_ExceptionalMap.Rmd) Error: processing vignette 'TN_ExceptionalMap.Rmd' failed with diagnostics: could not find function "lat_long2state" --- failed re-building ‘TN_ExceptionalMap.Rmd’ --- re-building ‘Tables_with_Notes.Rmd’ using rmarkdown Quitting from lines 108-118 [unnamed-chunk-6] (Tables_with_Notes.Rmd) Error: processing vignette 'Tables_with_Notes.Rmd' failed with diagnostics: argument is of length zero --- failed re-building ‘Tables_with_Notes.Rmd’ --- re-building ‘US_Locations_Fukushima_Radiation_Sampled_2011.Rmd’ using rmarkdown --- finished re-building ‘US_Locations_Fukushima_Radiation_Sampled_2011.Rmd’ --- re-building ‘View-PDF-table.Rmd’ using rmarkdown --- finished re-building ‘View-PDF-table.Rmd’ --- re-building ‘Weighted_CN-and-Composite_CN_Examples.Rmd’ using rmarkdown Quitting from lines 31-59 [unnamed-chunk-1] (Weighted_CN-and-Composite_CN_Examples.Rmd) Error: processing vignette 'Weighted_CN-and-Composite_CN_Examples.Rmd' failed with diagnostics: could not find function "weighted_CN" --- failed re-building ‘Weighted_CN-and-Composite_CN_Examples.Rmd’ SUMMARY: processing the following files failed: ‘Mannings-n-examples.Rmd’ ‘TN_ExceptionalMap.Rmd’ ‘Tables_with_Notes.Rmd’ ‘Weighted_CN-and-Composite_CN_Examples.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 2 NOTEs