downloading reverse dependencies ... downloading animate_0.3.9.4.tar.gz ... ok downloading bea.R_1.0.6.tar.gz ... ok downloading beakr_0.4.3.tar.gz ... ok downloading blogdown_1.19.tar.gz ... ok downloading boxr_0.3.6.tar.gz ... ok downloading BrownDog_0.2.1.tar.gz ... ok downloading bs4Dash_2.3.3.tar.gz ... ok downloading carbonate_0.1.4.tar.gz ... ok downloading cookies_0.2.3.tar.gz ... ok downloading DT_0.32.tar.gz ... ok downloading emuR_2.5.0.tar.gz ... ok downloading epitweetr_2.2.16.tar.gz ... ok downloading fiery_1.2.1.tar.gz ... ok downloading JBrowseR_0.10.2.tar.gz ... ok downloading jrc_0.6.0.tar.gz ... ok downloading MetaIntegrator_2.1.3.tar.gz ... ok downloading mlflow_2.11.1.tar.gz ... ok downloading opencpu_2.2.11.tar.gz ... ok downloading pagedown_0.20.tar.gz ... ok downloading plumber_1.2.2.tar.gz ... ok downloading plumbertableau_0.1.1.tar.gz ... ok downloading Rfacebook_0.6.15.tar.gz ... ok downloading rfigshare_0.3.8.tar.gz ... ok downloading Rlinkedin_0.2.tar.gz ... ok downloading servr_0.30.tar.gz ... ok downloading shiny_1.8.0.tar.gz ... ok downloading shinylight_1.1.2.tar.gz ... ok downloading shinyloadtest_1.1.0.tar.gz ... ok downloading shinytest_1.5.4.tar.gz ... ok downloading sleepwalk_0.3.2.tar.gz ... ok downloading telegram.bot_3.0.0.tar.gz ... ok downloading tfdeploy_0.6.1.tar.gz ... ok downloading VOSONDash_0.5.7.tar.gz ... ok downloading webdeveloper_1.0.5.tar.gz ... ok downloading webglobe_1.0.3.tar.gz ... ok downloading workflowr_1.7.1.tar.gz ... ok downloading AzureAuth_1.3.3.tar.gz ... ok downloading AzureRMR_2.4.4.tar.gz ... ok downloading curl_5.2.1.tar.gz ... ok downloading gargle_1.5.2.tar.gz ... ok downloading googleVis_0.7.1.tar.gz ... ok downloading httr_1.4.7.tar.gz ... ok downloading httr2_1.0.0.tar.gz ... ok downloading learnr_0.11.5.tar.gz ... ok downloading rlc_0.5.0.tar.gz ... ok downloading rorcid_0.7.0.tar.gz ... ok downloading rtweet_2.0.0.tar.gz ... ok downloading shinylive_0.1.1.tar.gz ... ok downloading sship_0.9.0.tar.gz ... ok downloading urlshorteneR_1.5.7.tar.gz ... ok downloading vetiver_0.2.5.tar.gz ... ok downloading vkR_0.2.tar.gz ... ok downloading vosonSML_0.32.7.tar.gz ... ok downloading webfakes_1.3.0.tar.gz ... ok downloading webshot_0.5.5.tar.gz ... ok downloading webshot2_0.1.1.tar.gz ... ok downloading websocket_1.4.1.tar.gz ... ok downloading webutils_1.2.0.tar.gz ... ok installing dependencies ‘archive’, ‘aws.ec2metadata’, ‘AzureStor’, ‘brotli’, ‘bundle’, ‘carrier’, ‘cereal’, ‘cloudml’, ‘COCONUT’, ‘compare’, ‘details’, ‘docopt’, ‘emayili’, ‘forge’, ‘GEOmetadb’, ‘handlr’, ‘HGNChelper’, ‘html5’, ‘httpuv’, ‘hwriter’, ‘jrc’, ‘luz’, ‘manhattanly’, ‘mlr3data’, ‘paws.machine.learning’, ‘pins’, ‘pixels’, ‘rapidoc’, ‘rcrossref’, ‘reactlog’, ‘redoc’, ‘reqres’, ‘revealjs’, ‘rgexf’, ‘Rmisc’, ‘robotstxt’, ‘smdocker’, ‘snplist’, ‘stacks’, ‘taskscheduleR’, ‘thematic’, ‘unix’, ‘vosonSML’, ‘wrassp’, ‘xaringan’ Warning: package ‘taskscheduleR’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘paws.compute’, ‘paws.developer.tools’, ‘paws.management’, ‘paws.storage’, ‘paws.security.identity’, ‘spiderbar’ begin installing package ‘paws.compute’ begin installing package ‘paws.developer.tools’ begin installing package ‘paws.management’ begin installing package ‘paws.storage’ begin installing package ‘paws.security.identity’ begin installing package ‘spiderbar’ begin installing package ‘thematic’ begin installing package ‘details’ begin installing package ‘wrassp’ begin installing package ‘compare’ begin installing package ‘emayili’ begin installing package ‘Rmisc’ begin installing package ‘GEOmetadb’ begin installing package ‘COCONUT’ begin installing package ‘manhattanly’ begin installing package ‘HGNChelper’ begin installing package ‘snplist’ begin installing package ‘forge’ begin installing package ‘carrier’ begin installing package ‘unix’ begin installing package ‘httpuv’ begin installing package ‘revealjs’ begin installing package ‘redoc’ begin installing package ‘rapidoc’ begin installing package ‘reactlog’ begin installing package ‘cloudml’ begin installing package ‘vosonSML’ begin installing package ‘html5’ * installing *source* package ‘rapidoc’ ... ** package ‘rapidoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rapidoc) begin installing package ‘AzureStor’ * installing *source* package ‘redoc’ ... ** package ‘redoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (redoc) begin installing package ‘aws.ec2metadata’ * installing *source* package ‘carrier’ ... ** package ‘carrier’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (carrier) begin installing package ‘docopt’ * installing *source* package ‘reactlog’ ... ** package ‘reactlog’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reactlog) begin installing package ‘hwriter’ * installing *source* package ‘COCONUT’ ... ** package ‘COCONUT’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (COCONUT) begin installing package ‘handlr’ * installing *source* package ‘Rmisc’ ... ** package ‘Rmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rmisc) begin installing package ‘archive’ * installing *source* package ‘forge’ ... ** package ‘forge’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forge) begin installing package ‘bundle’ * installing *source* package ‘revealjs’ ... ** package ‘revealjs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (revealjs) begin installing package ‘cereal’ * installing *source* package ‘details’ ... ** package ‘details’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (details) begin installing package ‘pins’ * installing *source* package ‘manhattanly’ ... ** package ‘manhattanly’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (manhattanly) begin installing package ‘luz’ * installing *source* package ‘compare’ ... ** package ‘compare’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compare) begin installing package ‘mlr3data’ * installing *source* package ‘html5’ ... ** package ‘html5’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (html5) begin installing package ‘paws.machine.learning’ * installing *source* package ‘unix’ ... ** package ‘unix’ successfully unpacked and MD5 sums checked ** using staged installation Checking for AppArmor... (Linux) Found pkg-config cflags/libs! Using PKG_CFLAGS= Using PKG_LIBS=-lapparmor ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvYLfQM/R.INSTALL1576f3bd2e6a6/unix/src' rm -f unix.so chroot.o fork.o process.o register.o rlimit.o userinfo.o util.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chroot.c -o chroot.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fork.c -o fork.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c process.c -o process.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlimit.c -o rlimit.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c userinfo.c -o userinfo.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DHAVE_APPARMOR -DSYS_BUILD_SAFE -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o gcc-13 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o unix.so chroot.o fork.o process.o register.o rlimit.o userinfo.o util.o -lapparmor -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpvYLfQM/R.INSTALL1576f3bd2e6a6/unix/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-unix/00new/unix/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (unix) begin installing package ‘stacks’ * installing *source* package ‘cloudml’ ... ** package ‘cloudml’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cloudml) begin installing package ‘brotli’ * installing *source* package ‘HGNChelper’ ... ** package ‘HGNChelper’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HGNChelper) * installing *source* package ‘thematic’ ... ** package ‘thematic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (thematic) * installing *source* package ‘hwriter’ ... ** package ‘hwriter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hwriter) * installing *source* package ‘aws.ec2metadata’ ... ** package ‘aws.ec2metadata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aws.ec2metadata) * installing *source* package ‘bundle’ ... ** package ‘bundle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bundle) * installing *source* package ‘cereal’ ... ** package ‘cereal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cereal) * installing *source* package ‘docopt’ ... ** package ‘docopt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (docopt) * installing *source* package ‘handlr’ ... ** package ‘handlr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (handlr) * installing *source* package ‘emayili’ ... ** package ‘emayili’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emayili) * installing *source* package ‘GEOmetadb’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GEOmetadb) * installing *source* package ‘vosonSML’ ... ** package ‘vosonSML’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vosonSML) * installing *source* package ‘AzureStor’ ... ** package ‘AzureStor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AzureStor) * installing *source* package ‘pins’ ... ** package ‘pins’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pins) * installing *source* package ‘stacks’ ... ** package ‘stacks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stacks) * installing *source* package ‘luz’ ... ** package ‘luz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (luz) * installing *source* package ‘mlr3data’ ... ** package ‘mlr3data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlr3data) * installing *source* package ‘wrassp’ ... ** package ‘wrassp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpv8G1Vb/R.INSTALL1576b933216d86/wrassp/src' gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/acf.c -o assp/acf.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dataobj.c -o assp/dataobj.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/freqconv.c -o assp/freqconv.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/mhs.c -o assp/mhs.o assp/mhs.c: In function ‘computeMHS’: assp/mhs.c:448:12: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 448 | int FILE_IN, FILE_OUT, CREATED, VOICED; | ^~~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/smp2dur.c -o assp/smp2dur.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspana.c -o assp/asspana.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/diff.c -o assp/diff.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/headers.c -o assp/headers.o assp/headers.c: In function ‘getAIFhdr’: assp/headers.c:882:12: warning: variable ‘blockSize’ set but not used [-Wunused-but-set-variable] 882 | uint32_t blockSize; | ^~~~~~~~~ assp/headers.c: In function ‘getCSLhdr’: assp/headers.c:1231:12: warning: variable ‘peakMag’ set but not used [-Wunused-but-set-variable] 1231 | int16_t peakMag; | ^~~~~~~ assp/headers.c: In function ‘getWAVhdr’: assp/headers.c:1828:22: warning: variable ‘lspPosMask’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~~~ assp/headers.c:1828:12: warning: variable ‘byteRate’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~ assp/headers.c: In function ‘putSSFFhdr’: assp/headers.c:2824:7: warning: unused variable ‘prev_header_length’ [-Wunused-variable] 2824 | int prev_header_length = strlen(header); | ^~~~~~~~~~~~~~~~~~ assp/headers.c: At top level: assp/headers.c:875:11: warning: ‘getAIFhdr’ defined but not used [-Wunused-function] 875 | LOCAL int getAIFhdr(DOBJ *dop) | ^~~~~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/miscstring.c -o assp/miscstring.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/spectra.c -o assp/spectra.o assp/spectra.c: In function ‘freeSPECT_GD’: assp/spectra.c:734:13: warning: unused variable ‘gd’ [-Wunused-variable] 734 | SPECT_GD *gd; | ^~ assp/spectra.c: In function ‘getCepstrum’: assp/spectra.c:932:23: warning: unused variable ‘M’ [-Wunused-variable] 932 | register long n, N, M, L; | ^ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspfio.c -o assp/asspfio.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dsputils.c -o assp/dsputils.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/isgerman.c -o assp/isgerman.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrand.c -o assp/myrand.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/statistics.c -o assp/statistics.o assp/statistics.c: In function ‘statPrintHist’: assp/statistics.c:478:10: warning: unused variable ‘centre’ [-Wunused-variable] 478 | double centre; | ^~~~~~ assp/statistics.c:477:10: warning: unused variable ‘i’ [-Wunused-variable] 477 | size_t i; | ^ assp/statistics.c:476:14: warning: unused variable ‘nd1’ [-Wunused-variable] 476 | int nd, nd1; | ^~~ assp/statistics.c:476:10: warning: unused variable ‘nd’ [-Wunused-variable] 476 | int nd, nd1; | ^~ assp/statistics.c:475:10: warning: unused variable ‘format’ [-Wunused-variable] 475 | char format[32]; | ^~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspmess.c -o assp/asspmess.o assp/asspmess.c: In function ‘prtAsspMsg’: assp/asspmess.c:169:9: warning: unused variable ‘funcVal’ [-Wunused-variable] 169 | int funcVal; | ^~~~~~~ assp/asspmess.c:168:20: warning: unused variable ‘indent’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~~~~ assp/asspmess.c:168:15: warning: unused variable ‘bug’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ assp/asspmess.c:168:9: warning: unused variable ‘msg’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fft.c -o assp/fft.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/ksv.c -o assp/ksv.o assp/ksv.c: In function ‘computeKSV’: assp/ksv.c:503:20: warning: unused variable ‘n’ [-Wunused-variable] 503 | int err, nd, n, type; | ^ assp/ksv.c:503:16: warning: unused variable ‘nd’ [-Wunused-variable] 503 | int err, nd, n, type; | ^~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrint.c -o assp/myrint.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/trace.c -o assp/trace.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/aucheck.c -o assp/aucheck.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fgetl.c -o assp/fgetl.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/labelobj.c -o assp/labelobj.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/numdecim.c -o assp/numdecim.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/winfuncs.c -o assp/winfuncs.o assp/winfuncs.c: In function ‘listWFs’: assp/winfuncs.c:1139:11: warning: unused variable ‘specs’ [-Wunused-variable] 1139 | WFDATA *specs; | ^~~~~ assp/winfuncs.c:1138:11: warning: unused variable ‘wPtr’ [-Wunused-variable] 1138 | WFLIST *wPtr; | ^~~~ assp/winfuncs.c:1137:14: warning: unused variable ‘m’ [-Wunused-variable] 1137 | int l, m; | ^ assp/winfuncs.c:1137:11: warning: unused variable ‘l’ [-Wunused-variable] 1137 | int l, m; | ^ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/auconv.c -o assp/auconv.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filter.c -o assp/filter.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/lpc.c -o assp/lpc.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/parsepath.c -o assp/parsepath.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/zcr.c -o assp/zcr.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/bitarray.c -o assp/bitarray.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filters.c -o assp/filters.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/math.c -o assp/math.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rfc.c -o assp/rfc.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/chain.c -o assp/chain.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fmt.c -o assp/fmt.o assp/fmt.c:1795:11: warning: ‘printRaw’ defined but not used [-Wunused-function] 1795 | LOCAL int printRaw(FMTDATA *fPtr, long frameNr, int numFMT, DOBJ *dop) | ^~~~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/memswab.c -o assp/memswab.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rms.c -o assp/rms.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataobj.c -o dataobj.o dataobj.c: In function ‘dobj2AsspDataObj’: dataobj.c:170:21: warning: unused variable ‘genVar’ [-Wunused-variable] 170 | TSSFF_Generic *genVar = NULL; | ^~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:405:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 405 | int8_t *i8Ptr; | ^~~~~ dataobj.c:397:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 397 | int i, | ^ dataobj.c: In function ‘sexp2dobj’: dataobj.c:608:21: warning: unused variable ‘varNames’ [-Wunused-variable] 608 | varNames; | ^~~~~~~~ dataobj.c:602:21: warning: unused variable ‘numFields’ [-Wunused-variable] 602 | size_t numFields = -1; | ^~~~~~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:894:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 894 | int8_t *i8Ptr; | ^~~~~ dataobj.c:886:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 886 | int i, | ^ dataobj.c: At top level: dataobj.c:142:1: warning: ‘DObjFinalizer’ defined but not used [-Wunused-function] 142 | DObjFinalizer(SEXP dPtr) | ^~~~~~~~~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:413:21: warning: ‘Rans’ may be used uninitialized [-Wmaybe-uninitialized] 413 | double *Rans; | ^~~~ dataobj.c:414:21: warning: ‘Ians’ may be used uninitialized [-Wmaybe-uninitialized] 414 | int *Ians; | ^~~~ dataobj.c:404:21: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 404 | uint8_t *u8Ptr; | ^~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:933:30: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 933 | u8Ptr[n] = (int8_t) numPtr[m + n * dop->numRecords]; | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dataobj.c:893:21: note: ‘u8Ptr’ was declared here 893 | uint8_t *u8Ptr; | ^~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c performAssp.c -o performAssp.o performAssp.c: In function ‘computeFilter’: performAssp.c:1231:21: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 1231 | int FILE_IN, | ^~~~~~~ In file included from wrassp.h:5, from performAssp.c:1: performAssp.c: In function ‘performAssp’: /home/hornik/tmp/R-d-gcc-13/include/Rinternals.h:901:33: warning: ‘utilsPackage’ may be used uninitialized [-Wmaybe-uninitialized] 901 | #define eval Rf_eval performAssp.c:1188:13: note: in expansion of macro ‘eval’ 1188 | eval(R_fcall3, utilsPackage); | ^~~~ performAssp.c:490:9: note: ‘utilsPackage’ was declared here 490 | utilsPackage, /* to update the prograssbar */ | ^~~~~~~~~~~~ /home/hornik/tmp/R-d-gcc-13/include/Rinternals.h:969:33: warning: ‘newVal’ may be used uninitialized [-Wmaybe-uninitialized] 969 | #define lang4 Rf_lang4 /home/hornik/tmp/R-d-gcc-13/include/Rinternals.h:371:36: note: in definition of macro ‘PROTECT’ 371 | #define PROTECT(s) Rf_protect(s) | ^ performAssp.c:1186:32: note: in expansion of macro ‘lang4’ 1186 | PROTECT(R_fcall3 = lang4(install("setTxtProgressBar"), pBar, newVal, R_NilValue)); | ^~~~~ performAssp.c:491:9: note: ‘newVal’ was declared here 491 | newVal, | ^~~~~~ performAssp.c:1217:12: warning: ‘res’ may be used uninitialized [-Wmaybe-uninitialized] 1217 | return res; | ^~~ performAssp.c:488:21: note: ‘res’ was declared here 488 | res, | ^~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c types.c -o types.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrassp_init.c -o wrassp_init.o gcc-13 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o wrassp.so assp/acf.o assp/dataobj.o assp/freqconv.o assp/mhs.o assp/smp2dur.o assp/asspana.o assp/diff.o assp/headers.o assp/miscstring.o assp/spectra.o assp/asspfio.o assp/dsputils.o assp/isgerman.o assp/myrand.o assp/statistics.o assp/asspmess.o assp/fft.o assp/ksv.o assp/myrint.o assp/trace.o assp/aucheck.o assp/fgetl.o assp/labelobj.o assp/numdecim.o assp/winfuncs.o assp/auconv.o assp/filter.o assp/lpc.o assp/parsepath.o assp/zcr.o assp/bitarray.o assp/filters.o assp/math.o assp/rfc.o assp/chain.o assp/fmt.o assp/memswab.o assp/rms.o dataobj.o performAssp.o types.o wrassp_init.o -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpv8G1Vb/R.INSTALL1576b933216d86/wrassp/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-wrassp/00new/wrassp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrassp) * installing *source* package ‘archive’ ... ** package ‘archive’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! PKG_CONFIG_PATH= PKG_CFLAGS= PKG_LIBS=-larchive ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpa8KTnc/R.INSTALL157b6620f83f02/archive/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive.cpp -o archive.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_extract.cpp -o archive_extract.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_read.cpp -o archive_read.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write.cpp -o archive_write.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write_direct.cpp -o archive_write_direct.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write_files.cpp -o archive_write_files.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c r_archive.cpp -o r_archive.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cli/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c connection/connection.c -o connection/connection.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o archive.so archive.o archive_extract.o archive_read.o archive_write.o archive_write_direct.o archive_write_files.o cpp11.o r_archive.o -larchive -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpa8KTnc/R.INSTALL157b6620f83f02/archive/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-archive/00new/archive/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (archive) * installing *source* package ‘snplist’ ... ** package ‘snplist’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNy4g1O/R.INSTALL1576ea5f06aa/snplist/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c exportPLINKSet.cpp -o exportPLINKSet.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o snplist.so exportPLINKSet.o init.o -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNy4g1O/R.INSTALL1576ea5f06aa/snplist/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-snplist/00new/snplist/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (snplist) * installing *source* package ‘brotli’ ... ** package ‘brotli’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpgYN3YH/R.INSTALL157da01988daa/brotli/src' rm -f enc/backward_references.o enc/bit_cost.o enc/block_splitter.o enc/brotli_bit_stream.o enc/cluster.o enc/compress_fragment_two_pass.o enc/compress_fragment.o enc/encode.o enc/entropy_encode.o enc/histogram.o enc/literal_cost.o enc/memory.o enc/metablock.o enc/static_dict.o enc/utf8_util.o dec/bit_reader.o dec/huffman.o dec/state.o dec/decode.o common/dictionary.o enc/backward_references_hq.o enc/dictionary_hash.o common/transform.o enc/encoder_dict.o common/platform.o common/context.o common/constants.o enc/command.o enc/fast_log.o wrapper.o brotli.so ../inst/bin/bro enc/libstatbrotli.a tools/brotli.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/backward_references.c -o enc/backward_references.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/bit_cost.c -o enc/bit_cost.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/block_splitter.c -o enc/block_splitter.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/brotli_bit_stream.c -o enc/brotli_bit_stream.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/cluster.c -o enc/cluster.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/compress_fragment_two_pass.c -o enc/compress_fragment_two_pass.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/compress_fragment.c -o enc/compress_fragment.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/encode.c -o enc/encode.o enc/encode.c:1473:20: warning: argument 5 of type ‘const uint8_t *’ {aka ‘const unsigned char *’} declared as a pointer [-Wvla-parameter] 1473 | const uint8_t* input_buffer, size_t* encoded_size, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from enc/encode.c:9: include/brotli/encode.h:314:19: note: previously declared as a variable length array ‘const uint8_t[input_size]’ {aka ‘const unsigned char[input_size]’} 314 | const uint8_t input_buffer[BROTLI_ARRAY_PARAM(input_size)], | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ enc/encode.c:1474:14: warning: argument 7 of type ‘uint8_t *’ {aka ‘unsigned char *’} declared as a pointer [-Wvla-parameter] 1474 | uint8_t* encoded_buffer) { | ~~~~~~~~~^~~~~~~~~~~~~~ include/brotli/encode.h:316:13: note: previously declared as a variable length array ‘uint8_t[*encoded_size]’ {aka ‘unsigned char[*encoded_size]’} 316 | uint8_t encoded_buffer[BROTLI_ARRAY_PARAM(*encoded_size)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/entropy_encode.c -o enc/entropy_encode.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/histogram.c -o enc/histogram.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/literal_cost.c -o enc/literal_cost.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/memory.c -o enc/memory.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/metablock.c -o enc/metablock.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/static_dict.c -o enc/static_dict.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/utf8_util.c -o enc/utf8_util.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dec/bit_reader.c -o dec/bit_reader.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dec/huffman.c -o dec/huffman.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dec/state.c -o dec/state.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dec/decode.c -o dec/decode.o dec/decode.c:2036:41: warning: argument 2 of type ‘const uint8_t *’ {aka ‘const unsigned char *’} declared as a pointer [-Wvla-parameter] 2036 | size_t encoded_size, const uint8_t* encoded_buffer, size_t* decoded_size, | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from dec/decode.c:7: include/brotli/decode.h:204:19: note: previously declared as a variable length array ‘const uint8_t[encoded_size]’ {aka ‘const unsigned char[encoded_size]’} 204 | const uint8_t encoded_buffer[BROTLI_ARRAY_PARAM(encoded_size)], | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dec/decode.c:2037:14: warning: argument 4 of type ‘uint8_t *’ {aka ‘unsigned char *’} declared as a pointer [-Wvla-parameter] 2037 | uint8_t* decoded_buffer) { | ~~~~~~~~~^~~~~~~~~~~~~~ include/brotli/decode.h:206:13: note: previously declared as a variable length array ‘uint8_t[*decoded_size]’ {aka ‘unsigned char[*decoded_size]’} 206 | uint8_t decoded_buffer[BROTLI_ARRAY_PARAM(*decoded_size)]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common/dictionary.c -o common/dictionary.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/backward_references_hq.c -o enc/backward_references_hq.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/dictionary_hash.c -o enc/dictionary_hash.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common/transform.c -o common/transform.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/encoder_dict.c -o enc/encoder_dict.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common/platform.c -o common/platform.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common/context.c -o common/context.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common/constants.c -o common/constants.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/command.c -o enc/command.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c enc/fast_log.c -o enc/fast_log.o ar rcs enc/libstatbrotli.a enc/backward_references.o enc/bit_cost.o enc/block_splitter.o enc/brotli_bit_stream.o enc/cluster.o enc/compress_fragment_two_pass.o enc/compress_fragment.o enc/encode.o enc/entropy_encode.o enc/histogram.o enc/literal_cost.o enc/memory.o enc/metablock.o enc/static_dict.o enc/utf8_util.o dec/bit_reader.o dec/huffman.o dec/state.o dec/decode.o common/dictionary.o enc/backward_references_hq.o enc/dictionary_hash.o common/transform.o enc/encoder_dict.o common/platform.o common/context.o common/constants.o enc/command.o enc/fast_log.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tools/brotli.c -o tools/brotli.o mkdir -p ../inst/bin g++-13 -std=gnu++17 -o ../inst/bin/bro tools/brotli.o -Lenc -lstatbrotli -Wl,-O1 gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -DBROTLI_BUILD_PORTABLE -Iinclude -include config.h -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrapper.c -o wrapper.o gcc-13 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o brotli.so wrapper.o -Lenc -lstatbrotli -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpgYN3YH/R.INSTALL157da01988daa/brotli/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-brotli/00new/brotli/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brotli) begin installing package ‘reqres’ * installing *source* package ‘spiderbar’ ... ** package ‘spiderbar’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpukutx7/R.INSTALL1576a3725762f2/spiderbar/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c agent.cpp -o agent.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c directive.cpp -o directive.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c psl.cpp -o psl.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c punycode.cpp -o punycode.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c repmain.cpp -o repmain.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c robots.cpp -o robots.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c url.cpp -o url.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utf8.cpp -o utf8.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o spiderbar.so RcppExports.o agent.o directive.o psl.o punycode.o repmain.o robots.o url.o utf8.o -L. -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpukutx7/R.INSTALL1576a3725762f2/spiderbar/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-spiderbar/00new/spiderbar/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spiderbar) begin installing package ‘robotstxt’ * installing *source* package ‘robotstxt’ ... ** package ‘robotstxt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (robotstxt) * installing *source* package ‘reqres’ ... ** package ‘reqres’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reqres) * installing *source* package ‘paws.developer.tools’ ... ** package ‘paws.developer.tools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.developer.tools) * installing *source* package ‘paws.storage’ ... ** package ‘paws.storage’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.storage) * installing *source* package ‘paws.management’ ... ** package ‘paws.management’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.management) * installing *source* package ‘paws.compute’ ... ** package ‘paws.compute’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.compute) * installing *source* package ‘paws.machine.learning’ ... ** package ‘paws.machine.learning’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.machine.learning) * installing *source* package ‘paws.security.identity’ ... ** package ‘paws.security.identity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.security.identity) begin installing package ‘smdocker’ * installing *source* package ‘smdocker’ ... ** package ‘smdocker’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (smdocker) * installing *source* package ‘httpuv’ ... ** using staged installation ** Using libuv found by pkg-config in /usr ** PKG_CFLAGS= ** PKG_LIBS=-luv -lpthread -ldl -lrt ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpETBLoH/R.INSTALL1576f912e6d4c0/httpuv/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c callback.cpp -o callback.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c callbackqueue.cpp -o callbackqueue.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c filedatasource-unix.cpp -o filedatasource-unix.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c filedatasource-win.cpp -o filedatasource-win.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c fs.cpp -o fs.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c gzipdatasource.cpp -o gzipdatasource.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c http.cpp -o http.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c httprequest.cpp -o httprequest.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c httpresponse.cpp -o httpresponse.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c httpuv.cpp -o httpuv.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c md5.c -o md5.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c mime.cpp -o mime.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c socket.cpp -o socket.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c staticpath.cpp -o staticpath.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c thread.cpp -o thread.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c timegm.cpp -o timegm.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c uvutil.cpp -o uvutil.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c webapplication.cpp -o webapplication.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c websockets-base.cpp -o websockets-base.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c websockets-hixie76.cpp -o websockets-hixie76.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c websockets-hybi03.cpp -o websockets-hybi03.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c websockets-ietf.cpp -o websockets-ietf.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c websockets.cpp -o websockets.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c winutils.cpp -o winutils.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c http-parser/http_parser.c -o http-parser/http_parser.o gcc-13 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sha1/sha1.c -o sha1/sha1.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-13/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/later/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O2 -Wall -pedantic -mtune=native -c base64/base64.cpp -o base64/base64.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-13/lib -Wl,-O1 -o httpuv.so RcppExports.o callback.o callbackqueue.o filedatasource-unix.o filedatasource-win.o fs.o gzipdatasource.o http.o httprequest.o httpresponse.o httpuv.o md5.o mime.o socket.o staticpath.o thread.o timegm.o utils.o uvutil.o webapplication.o websockets-base.o websockets-hixie76.o websockets-hybi03.o websockets-ietf.o websockets.o winutils.o -luv -lpthread -ldl -lrt ./http-parser/http_parser.o ./sha1/sha1.o ./base64/base64.o -pthread -L/home/hornik/tmp/R-d-gcc-13/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpETBLoH/R.INSTALL1576f912e6d4c0/httpuv/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-httpuv/00new/httpuv/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (httpuv) begin installing package ‘xaringan’ begin installing package ‘rcrossref’ begin installing package ‘pixels’ begin installing package ‘rgexf’ begin installing package ‘jrc’ * installing *source* package ‘xaringan’ ... ** package ‘xaringan’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xaringan) * installing *source* package ‘pixels’ ... ** package ‘pixels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pixels) * installing *source* package ‘jrc’ ... ** package ‘jrc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jrc) * installing *source* package ‘rgexf’ ... ** package ‘rgexf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgexf) * installing *source* package ‘rcrossref’ ... ** package ‘rcrossref’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rcrossref) checking httpuv_1.6.15.tar.gz ... checking animate_0.3.9.4.tar.gz ... checking bea.R_1.0.6.tar.gz ... checking beakr_0.4.3.tar.gz ... checking blogdown_1.19.tar.gz ... checking boxr_0.3.6.tar.gz ... checking BrownDog_0.2.1.tar.gz ... checking bs4Dash_2.3.3.tar.gz ... checking carbonate_0.1.4.tar.gz ... checking cookies_0.2.3.tar.gz ... checking DT_0.32.tar.gz ... checking emuR_2.5.0.tar.gz ... checking epitweetr_2.2.16.tar.gz ... checking fiery_1.2.1.tar.gz ... checking JBrowseR_0.10.2.tar.gz ... checking jrc_0.6.0.tar.gz ... checking MetaIntegrator_2.1.3.tar.gz ... checking mlflow_2.11.1.tar.gz ... checking opencpu_2.2.11.tar.gz ... checking pagedown_0.20.tar.gz ... checking plumber_1.2.2.tar.gz ... checking plumbertableau_0.1.1.tar.gz ... checking Rfacebook_0.6.15.tar.gz ... checking rfigshare_0.3.8.tar.gz ... checking Rlinkedin_0.2.tar.gz ... checking servr_0.30.tar.gz ... checking shiny_1.8.0.tar.gz ... checking shinylight_1.1.2.tar.gz ... checking rtweet_2.0.0.tar.gz ... checking webshot_0.5.5.tar.gz ... checking AzureAuth_1.3.3.tar.gz ... checking vosonSML_0.32.7.tar.gz ... checking webdeveloper_1.0.5.tar.gz ... checking urlshorteneR_1.5.7.tar.gz ... checking tfdeploy_0.6.1.tar.gz ... checking telegram.bot_3.0.0.tar.gz ... checking httr2_1.0.0.tar.gz ... checking rorcid_0.7.0.tar.gz ... checking httr_1.4.7.tar.gz ... checking vkR_0.2.tar.gz ... checking AzureRMR_2.4.4.tar.gz ... checking shinytest_1.5.4.tar.gz ... checking rlc_0.5.0.tar.gz ... checking sship_0.9.0.tar.gz ... checking workflowr_1.7.1.tar.gz ... checking sleepwalk_0.3.2.tar.gz ... checking vetiver_0.2.5.tar.gz ... checking VOSONDash_0.5.7.tar.gz ... checking shinylive_0.1.1.tar.gz ... checking googleVis_0.7.1.tar.gz ... checking websocket_1.4.1.tar.gz ... checking webutils_1.2.0.tar.gz ... checking webglobe_1.0.3.tar.gz ... checking learnr_0.11.5.tar.gz ... checking gargle_1.5.2.tar.gz ... checking webfakes_1.3.0.tar.gz ... checking shinyloadtest_1.1.0.tar.gz ... checking curl_5.2.1.tar.gz ... checking webshot2_0.1.1.tar.gz ... Depends: Package: httpuv Depends: R (>= 2.15.1) Imports: later (>= 0.8.0), promises, R6, Rcpp (>= 1.0.7), utils LinkingTo: later, Rcpp Timings: user system elapsed httpuv 136.938 11.046 149.141 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 9 49 Check results summary: httpuv ... OK rdepends_animate ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_AzureAuth ... OK rdepends_AzureRMR ... OK rdepends_bea.R ... OK rdepends_beakr ... OK rdepends_blogdown ... OK rdepends_boxr ... OK rdepends_BrownDog ... OK rdepends_bs4Dash ... OK rdepends_carbonate ... OK rdepends_cookies ... OK rdepends_curl ... NOTE * checking compiled code ... NOTE rdepends_DT ... OK rdepends_emuR ... OK rdepends_epitweetr ... NOTE * checking package dependencies ... NOTE rdepends_fiery ... OK rdepends_gargle ... OK rdepends_googleVis ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_httr ... OK rdepends_httr2 ... OK rdepends_JBrowseR ... OK rdepends_jrc ... OK rdepends_learnr ... OK rdepends_MetaIntegrator ... OK rdepends_mlflow ... OK rdepends_opencpu ... OK rdepends_pagedown ... OK rdepends_plumber ... OK rdepends_plumbertableau ... OK rdepends_Rfacebook ... OK rdepends_rfigshare ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_rlc ... OK rdepends_Rlinkedin ... NOTE * checking LazyData ... NOTE rdepends_rorcid ... OK rdepends_rtweet ... OK rdepends_servr ... OK rdepends_shiny ... OK rdepends_shinylight ... OK rdepends_shinylive ... OK rdepends_shinyloadtest ... OK rdepends_shinytest ... OK rdepends_sleepwalk ... OK rdepends_sship ... OK rdepends_telegram.bot ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_tfdeploy ... NOTE * checking LazyData ... NOTE rdepends_urlshorteneR ... OK rdepends_vetiver ... OK rdepends_vkR ... OK rdepends_VOSONDash ... OK rdepends_vosonSML ... OK rdepends_webdeveloper ... OK rdepends_webfakes ... OK rdepends_webglobe ... OK rdepends_webshot ... OK rdepends_webshot2 ... OK rdepends_websocket ... NOTE * checking C++ specification ... NOTE * checking for GNU extensions in Makefiles ... NOTE rdepends_webutils ... OK rdepends_workflowr ... OK Check results changes: Package: plumber [Old version: 1.2.1, New version: 1.2.2] Check: tests Old result: ERROR New result: OK