* using log directory 'd:/RCompile/CRANincoming/R-devel/httk.Rcheck'
* using R Under development (unstable) (2024-08-23 r87049 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'httk/DESCRIPTION' ... OK
* this is package 'httk' version '2.4.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [44s] NOTE
Maintainer: 'John Wambaugh <wambaugh.john@epa.gov>'

Found the following (possibly) invalid URLs:
  URL: https://ehp.niehs.nih.gov/doi/full/10.1289/EHP2920
    From: man/wang2018.Rd
    Status: 403
    Message: Forbidden
  URL: https://www.corning.com/catalog/cls/documents/application-notes/CLS-AN-209.pdf
    From: man/well_param.Rd
    Status: 403
    Message: Forbidden
  URL: https://www.sciencedirect.com/science/article/pii/S2468111320300463
    From: man/load_pradeep2020.Rd
          man/pradeep2020.Rd
    Status: 403
    Message: Forbidden
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'httk' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 13.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [31s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [60s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [198s] OK
  Running '1comp_test.R' [20s]
  Comparing '1comp_test.Rout' to '1comp_test.Rout.save' ...163,167d162
< MA :  19 
< MW :  440.4 
< Pow :  0.8903 
< Rblood2plasma :  0.8419 
< Vdist :  0.7338 
172a168
> MA :  19 
173a170
> MW :  440.4 
176a174,176
> Pow :  0.8903 
> Rblood2plasma :  0.8419 
> Vdist :  0.7338 
  Running '3comp_test.R' [18s]
  Comparing '3comp_test.Rout' to '3comp_test.Rout.save' ...319a320
> hematocrit :  0.44 
320a322
> kgutabs :  0.3711 
323a326
> liver.density :  1.05 
324a328
> million.cells.per.gliver :  110 
325a330,331
> pKa_Accept :  8.09 
> pKa_Donor :  2.81 
335,340d340
< hematocrit :  0.44 
< kgutabs :  0.3711 
< liver.density :  1.05 
< million.cells.per.gliver :  110 
< pKa_Accept :  8.09 
< pKa_Donor :  2.81 
  Running '3compss_test.R' [10s]
  Comparing '3compss_test.Rout' to '3compss_test.Rout.save' ...78a79,81
> hepatic.bioavailability :  1 
> liver.density :  1.05 
> million.cells.per.gliver :  110 
84,86d86
< hepatic.bioavailability :  1 
< liver.density :  1.05 
< million.cells.per.gliver :  110 
  Running 'adddata_test.R'
  Comparing 'adddata_test.Rout' to 'adddata_test.Rout.save' ... OK
  Running 'caco2_test.R' [16s]
  Comparing 'caco2_test.Rout' to 'caco2_test.Rout.save' ... OK
  Running 'cheminfo_test.R'
  Comparing 'cheminfo_test.Rout' to 'cheminfo_test.Rout.save' ... OK
  Running 'fetal_pbtk_testing.R' [12s]
  Comparing 'fetal_pbtk_testing.Rout' to 'fetal_pbtk_testing.Rout.save' ...140a141,144
> adipose_density :  0.95 
> amnf_density :  1.01 
> arterial_blood_fraction :  0.16 
> brain_density :  1.04 
150a155,162
> fblood_weight_ratio :  80 
> fBW_gompertz_theta0 :  0.0018282 
> fBW_gompertz_theta1 :  1.1735 
> fBW_gompertz_theta2 :  0.077577 
> ffmx_density :  1.1 
> fhematocrit_cubic_theta1 :  4.5061 
> fhematocrit_cubic_theta2 :  -0.18487 
> fhematocrit_cubic_theta3 :  0.0026766 
155a168,171
> gut_density :  1.04 
> hematocrit_quadratic_theta0 :  39.192 
> hematocrit_quadratic_theta1 :  -0.10562 
> hematocrit_quadratic_theta2 :  -0.00071045 
166a183,184
> kgutabs :  0.3711 
> kidney_density :  1.05 
173a192,193
> liver_density :  1.05 
> lung_density :  1.05 
174a195
> million.cells.per.gliver :  110 
175a197,201
> pH_Plasma_fet :  7.28 
> pH_Plasma_mat :  7.38 
> pKa_Accept :  NA 
> pKa_Donor :  9.46 
> placenta_density :  1.02 
176a203
> pre_pregnant_BW :  61.1 
220a248,249
> term :  40 
> thyroid_density :  1.05 
223a253
> venous_blood_fraction :  0.595 
256,285d285
< adipose_density :  0.95 
< amnf_density :  1.01 
< arterial_blood_fraction :  0.16 
< brain_density :  1.04 
< fBW_gompertz_theta0 :  0.0018282 
< fBW_gompertz_theta1 :  1.1735 
< fBW_gompertz_theta2 :  0.077577 
< fblood_weight_ratio :  80 
< ffmx_density :  1.1 
< fhematocrit_cubic_theta1 :  4.5061 
< fhematocrit_cubic_theta2 :  -0.18487 
< fhematocrit_cubic_theta3 :  0.0026766 
< gut_density :  1.04 
< hematocrit_quadratic_theta0 :  39.192 
< hematocrit_quadratic_theta1 :  -0.10562 
< hematocrit_quadratic_theta2 :  -0.00071045 
< kgutabs :  0.3711 
< kidney_density :  1.05 
< liver_density :  1.05 
< lung_density :  1.05 
< million.cells.per.gliver :  110 
< pH_Plasma_fet :  7.28 
< pH_Plasma_mat :  7.38 
< pKa_Accept :  NA 
< pKa_Donor :  9.46 
< placenta_density :  1.02 
< pre_pregnant_BW :  61.1 
< term :  40 
< thyroid_density :  1.05 
< venous_blood_fraction :  0.595 
  Running 'ivive_test.R' [21s]
  Comparing 'ivive_test.Rout' to 'ivive_test.Rout.save' ... OK
  Running 'montecarlo_tests.R' [35s]
  Comparing 'montecarlo_tests.Rout' to 'montecarlo_tests.Rout.save' ... OK
  Running 'other_tests.R' [20s]
  Comparing 'other_tests.Rout' to 'other_tests.Rout.save' ... OK
  Running 'pbtk_test.R' [16s]
  Comparing 'pbtk_test.Rout' to 'pbtk_test.Rout.save' ...219a220
> hematocrit :  0.44 
220a222
> kgutabs :  0.3711 
225a228
> liver.density :  1.05 
226a230
> million.cells.per.gliver :  110 
227a232,233
> pKa_Accept :  8.09 
> pKa_Donor :  2.81 
242,247d247
< hematocrit :  0.44 
< kgutabs :  0.3711 
< liver.density :  1.05 
< million.cells.per.gliver :  110 
< pKa_Accept :  8.09 
< pKa_Donor :  2.81 
  Running 'solve_gas_test.R'
  Comparing 'solve_gas_test.Rout' to 'solve_gas_test.Rout.save' ...133a134
> hematocrit :  0.44 
135a137
> kgutabs :  0.3711 
138a141
> km :  1 
141a145,146
> kUrtc :  11 
> liver.density :  1.05 
142a148
> million.cells.per.gliver :  110 
143a150,151
> pKa_Accept :  NA 
> pKa_Donor :  NA 
157a166
> vmax :  0 
161,169d169
< hematocrit :  0.44 
< kUrtc :  11 
< kgutabs :  0.3711 
< km :  1 
< liver.density :  1.05 
< million.cells.per.gliver :  110 
< pKa_Accept :  NA 
< pKa_Donor :  NA 
< vmax :  0 
  Running 'unit_test.R'
  Comparing 'unit_test.Rout' to 'unit_test.Rout.save' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [101s] OK
* checking PDF version of manual ... [26s] OK
* checking HTML version of manual ... [30s] OK
* DONE
Status: 1 NOTE