* installing *source* package ‘houba’ ...
** this is package ‘houba’ version ‘0.1.0’
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.7 (3+b2)’
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c MMatrixToRArray.cpp -o MMatrixToRArray.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c MMatrixToRMatrix.cpp -o MMatrixToRMatrix.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c colSums.cpp -o colSums.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c copy_values.cpp -o copy_values.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c cw_arithmetic.cpp -o cw_arithmetic.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c extract_marray.cpp -o extract_marray.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c extract_mmatrix.cpp -o extract_mmatrix.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c extract_mvector.cpp -o extract_mvector.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c flush.cpp -o flush.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c isnullptr.cpp -o isnullptr.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c link_marray.cpp -o link_marray.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c link_mmatrix.cpp -o link_mmatrix.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c print_debug.cpp -o print_debug.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c rowSums.cpp -o rowSums.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c set_values_marray.cpp -o set_values_marray.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c set_values_mmatrix.cpp -o set_values_mmatrix.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I ../inst/include/houba/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c setdims.cpp -o setdims.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o houba.so MMatrixToRArray.o MMatrixToRMatrix.o RcppExports.o colSums.o copy_values.o cw_arithmetic.o extract_marray.o extract_mmatrix.o extract_mvector.o flush.o isnullptr.o link_marray.o link_mmatrix.o print_debug.o rowSums.o set_values_marray.o set_values_mmatrix.o setdims.o -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/houba.Rcheck/00LOCK-houba/00new/houba/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for ‘apply’ from package ‘base’ in package ‘houba’
Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘houba’
Creating a generic function for ‘colSums’ from package ‘base’ in package ‘houba’
Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘houba’
Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘houba’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (houba)