R Under development (unstable) (2025-10-01 r88895 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(hmde)
> 
> test_check("hmde")

SAMPLING FOR MODEL 'constant_single_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 4.1e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.41 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: No variance estimation is
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Chain 1: 

SAMPLING FOR MODEL 'canham_multi_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.001722 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 17.22 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: No variance estimation is
Chain 1:          performed for num_warmup < 20
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Chain 1: 
Chain 1:  Elapsed Time: 1.486 seconds (Warm-up)
Chain 1:                0.068 seconds (Sampling)
Chain 1:                1.554 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'canham_multi_ind' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.002361 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 23.61 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: WARNING: No variance estimation is
Chain 2:          performed for num_warmup < 20
Chain 2: 
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Chain 2: 
Chain 2:  Elapsed Time: 2.1 seconds (Warm-up)
Chain 2:                0.95 seconds (Sampling)
Chain 2:                3.05 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'constant_single_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 1.1e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.11 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
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Chain 1: 
Chain 1:  Elapsed Time: 0.296 seconds (Warm-up)
Chain 1:                1.05 seconds (Sampling)
Chain 1:                1.346 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 4.9e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.49 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: No variance estimation is
Chain 1:          performed for num_warmup < 20
Chain 1: 
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Chain 1:  Elapsed Time: 0.005 seconds (Warm-up)
Chain 1:                0.002 seconds (Sampling)
Chain 1:                0.007 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 1.4e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.14 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: WARNING: No variance estimation is
Chain 2:          performed for num_warmup < 20
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Chain 2: 
Chain 2:  Elapsed Time: 0.005 seconds (Warm-up)
Chain 2:                0.007 seconds (Sampling)
Chain 2:                0.012 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'vb_single_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 3.4e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.34 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
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Chain 1: 
Chain 1:  Elapsed Time: 0.823 seconds (Warm-up)
Chain 1:                0.879 seconds (Sampling)
Chain 1:                1.702 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'vb_multi_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 9.4e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.94 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: No variance estimation is
Chain 1:          performed for num_warmup < 20
Chain 1: 
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Chain 1: 
Chain 1:  Elapsed Time: 0.035 seconds (Warm-up)
Chain 1:                0.032 seconds (Sampling)
Chain 1:                0.067 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'vb_multi_ind' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 3.5e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: WARNING: No variance estimation is
Chain 2:          performed for num_warmup < 20
Chain 2: 
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Chain 2: 
Chain 2:  Elapsed Time: 0.021 seconds (Warm-up)
Chain 2:                0.027 seconds (Sampling)
Chain 2:                0.048 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 4.2e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.42 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
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Chain 1: 
Chain 1:  Elapsed Time: 0.055 seconds (Warm-up)
Chain 1:                0.032 seconds (Sampling)
Chain 1:                0.087 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 4.8e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.48 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
Chain 1: 
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Chain 1: 
Chain 1:  Elapsed Time: 0.048 seconds (Warm-up)
Chain 1:                0.184 seconds (Sampling)
Chain 1:                0.232 seconds (Total)
Chain 1: 
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 87 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-hmde_plot_de_pieces.R:17:3'): Execution and output: plot_de_pieces function ──
`plot` does not have names.
── Failure ('test-hmde_plot_obs_est_inds.R:5:3'): Execution and output: plot_obs_est_inds function ──
`plot` does not have names.

[ FAIL 2 | WARN 0 | SKIP 0 | PASS 87 ]
Error: Test failures
Execution halted