* using log directory 'd:/RCompile/CRANincoming/R-devel/hmde.Rcheck'
* using R Under development (unstable) (2025-10-01 r88895 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'hmde/DESCRIPTION' ... OK
* this is package 'hmde' version '1.2.2'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [14s] OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'hmde' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.2.0'
* checking C++ specification ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [20s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [15s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [20s] ERROR
  Running 'testthat.R' [20s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(hmde)
  > 
  > test_check("hmde")
  
  SAMPLING FOR MODEL 'constant_single_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 4.1e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.41 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: No variance estimation is
  Chain 1:          performed for num_warmup < 20
  Chain 1: 
  Chain 1: Iteration:  1 / 20 [  5%]  (Warmup)
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  Chain 1: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0 seconds (Warm-up)
  Chain 1:                0 seconds (Sampling)
  Chain 1:                0 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'canham_multi_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 0.001722 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 17.22 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: No variance estimation is
  Chain 1:          performed for num_warmup < 20
  Chain 1: 
  Chain 1: Iteration:  1 / 20 [  5%]  (Warmup)
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  Chain 1: Iteration: 18 / 20 [ 90%]  (Sampling)
  Chain 1: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 1.486 seconds (Warm-up)
  Chain 1:                0.068 seconds (Sampling)
  Chain 1:                1.554 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'canham_multi_ind' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 0.002361 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 23.61 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: WARNING: No variance estimation is
  Chain 2:          performed for num_warmup < 20
  Chain 2: 
  Chain 2: Iteration:  1 / 20 [  5%]  (Warmup)
  Chain 2: Iteration:  2 / 20 [ 10%]  (Warmup)
  Chain 2: Iteration:  4 / 20 [ 20%]  (Warmup)
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  Chain 2: Iteration: 18 / 20 [ 90%]  (Sampling)
  Chain 2: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 2.1 seconds (Warm-up)
  Chain 2:                0.95 seconds (Sampling)
  Chain 2:                3.05 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'constant_single_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 1.1e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.11 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: Iteration:   1 / 1000 [  0%]  (Warmup)
  Chain 1: Iteration: 100 / 1000 [ 10%]  (Warmup)
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  Chain 1: Iteration: 1000 / 1000 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0.296 seconds (Warm-up)
  Chain 1:                1.05 seconds (Sampling)
  Chain 1:                1.346 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 4.9e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.49 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: No variance estimation is
  Chain 1:          performed for num_warmup < 20
  Chain 1: 
  Chain 1: Iteration:  1 / 20 [  5%]  (Warmup)
  Chain 1: Iteration:  2 / 20 [ 10%]  (Warmup)
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  Chain 1: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0.005 seconds (Warm-up)
  Chain 1:                0.002 seconds (Sampling)
  Chain 1:                0.007 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 1.4e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.14 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: WARNING: No variance estimation is
  Chain 2:          performed for num_warmup < 20
  Chain 2: 
  Chain 2: Iteration:  1 / 20 [  5%]  (Warmup)
  Chain 2: Iteration:  2 / 20 [ 10%]  (Warmup)
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  Chain 2: Iteration: 18 / 20 [ 90%]  (Sampling)
  Chain 2: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 0.005 seconds (Warm-up)
  Chain 2:                0.007 seconds (Sampling)
  Chain 2:                0.012 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'vb_single_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 3.4e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.34 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: Iteration:   1 / 1000 [  0%]  (Warmup)
  Chain 1: Iteration: 100 / 1000 [ 10%]  (Warmup)
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  Chain 1: Iteration: 1000 / 1000 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0.823 seconds (Warm-up)
  Chain 1:                0.879 seconds (Sampling)
  Chain 1:                1.702 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'vb_multi_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 9.4e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.94 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: No variance estimation is
  Chain 1:          performed for num_warmup < 20
  Chain 1: 
  Chain 1: Iteration:  1 / 20 [  5%]  (Warmup)
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  Chain 1: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 1: 
  Chain 1:  Elapsed Time: 0.035 seconds (Warm-up)
  Chain 1:                0.032 seconds (Sampling)
  Chain 1:                0.067 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'vb_multi_ind' NOW (CHAIN 2).
  Chain 2: 
  Chain 2: Gradient evaluation took 3.5e-05 seconds
  Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds.
  Chain 2: Adjust your expectations accordingly!
  Chain 2: 
  Chain 2: 
  Chain 2: WARNING: No variance estimation is
  Chain 2:          performed for num_warmup < 20
  Chain 2: 
  Chain 2: Iteration:  1 / 20 [  5%]  (Warmup)
  Chain 2: Iteration:  2 / 20 [ 10%]  (Warmup)
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  Chain 2: Iteration: 20 / 20 [100%]  (Sampling)
  Chain 2: 
  Chain 2:  Elapsed Time: 0.021 seconds (Warm-up)
  Chain 2:                0.027 seconds (Sampling)
  Chain 2:                0.048 seconds (Total)
  Chain 2: 
  
  SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 4.2e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.42 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: There aren't enough warmup iterations to fit the
  Chain 1:          three stages of adaptation as currently configured.
  Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
  Chain 1:          the given number of warmup iterations:
  Chain 1:            init_buffer = 3
  Chain 1:            adapt_window = 20
  Chain 1:            term_buffer = 2
  Chain 1: 
  Chain 1: Iteration:  1 / 50 [  2%]  (Warmup)
  Chain 1: Iteration:  5 / 50 [ 10%]  (Warmup)
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.055 seconds (Warm-up)
  Chain 1:                0.032 seconds (Sampling)
  Chain 1:                0.087 seconds (Total)
  Chain 1: 
  
  SAMPLING FOR MODEL 'constant_multi_ind' NOW (CHAIN 1).
  Chain 1: 
  Chain 1: Gradient evaluation took 4.8e-05 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.48 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1: 
  Chain 1: 
  Chain 1: WARNING: There aren't enough warmup iterations to fit the
  Chain 1:          three stages of adaptation as currently configured.
  Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
  Chain 1:          the given number of warmup iterations:
  Chain 1:            init_buffer = 3
  Chain 1:            adapt_window = 20
  Chain 1:            term_buffer = 2
  Chain 1: 
  Chain 1: Iteration:  1 / 50 [  2%]  (Warmup)
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  Chain 1: 
  Chain 1:  Elapsed Time: 0.048 seconds (Warm-up)
  Chain 1:                0.184 seconds (Sampling)
  Chain 1:                0.232 seconds (Total)
  Chain 1: 
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 87 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-hmde_plot_de_pieces.R:17:3'): Execution and output: plot_de_pieces function ──
  `plot` does not have names.
  ── Failure ('test-hmde_plot_obs_est_inds.R:5:3'): Execution and output: plot_obs_est_inds function ──
  `plot` does not have names.
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 87 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [206s] OK
* checking PDF version of manual ... [22s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR