* using log directory ‘/srv/hornik/tmp/CRAN_pretest/hictkR.Rcheck’
* using R Under development (unstable) (2025-08-17 r88631)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (3+b1)
    Debian flang-new version 19.1.7 (3+b1)
* running under: Debian GNU/Linux forky/sid
* using session charset: UTF-8
* checking for file ‘hictkR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘hictkR’ version ‘0.1.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [4s/6s] NOTE
Maintainer: ‘Roberto Rossini <roberros@uio.no>’

New submission

Possibly misspelled words in DESCRIPTION:
  hic (3:48, 17:63)
  mcool (17:51)

Found the following (possibly) invalid URLs:
  URL: https://github.com/paulsengroup/hictkR/blob/main/tools/conanfile.py
    From: README.md
    Status: 404
    Message: Not Found
  URL: https://github.com/paulsengroup/hictkR/blob/main/tools/generate_makevars.py
    From: README.md
    Status: 404
    Message: Not Found
  URL: https://paulsengroup.github.io/hictkR (moved to https://paulsengroup.github.io/hictkR/)
    From: README.md
    Status: 301
    Message: Moved Permanently
For content that is 'Moved Permanently', please change http to https,
add trailing slashes, or replace the old by the new URL.

Size of tarball: 8537915 bytes
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘hictkR’ can be installed ... [1992s/276s] ERROR
Installation failed.
See ‘/srv/hornik/tmp/CRAN_pretest/hictkR.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR, 1 NOTE