* using log directory 'd:/RCompile/CRANincoming/R-devel/hesim.Rcheck' * using R Under development (unstable) (2024-02-09 r85879 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'hesim/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'hesim' version '0.5.4' * checking CRAN incoming feasibility ... [14s] Note_to_CRAN_maintainers Maintainer: 'Devin Incerti ' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'hesim' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 12.3.0' * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... NOTE Mismatches for apparent methods not registered: create_StateVals: function(object, ...) create_StateVals.eval_model: function(object, cost, name, init_args) check: function(object, ...) check.params_lm: function(object) check: function(object, ...) check.params_surv: function(object) check: function(object, ...) check.eval_model: function(x) check: function(object, ...) check.hesim_data: function(x) check: function(object, ...) check.input_mats: function(object) check: function(object, ...) check.tparams_transprobs: function(object) check: function(object, ...) check.id_attributes: function(object) check: function(object, ...) check.params_mlogit: function(object) check: function(object, ...) check.eval_rng: function(object) check: function(object, ...) check.coeflist: function(coefs) check: function(object, ...) check.params_surv_list: function(object) check: function(object, ...) check.model_def: function(x) new_tparams_transprobs: function(object, ...) new_tparams_transprobs.data.table: function(object) new_tparams_transprobs: function(object, ...) new_tparams_transprobs.array: function(object, tpmatrix_id, times, grp_id, patient_wt) Apparent methods for exported generics not registered: create_StateVals.eval_model plot_ceac.default sim_ev.NULL tparams_transprobs.eval_model See section 'Registering S3 methods' in the 'Writing R Extensions' manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [20s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [25s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [44s] OK Running 'testthat.R' [44s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [203s] OK * checking PDF version of manual ... [28s] OK * checking HTML version of manual ... [21s] OK * DONE Status: 1 NOTE