context("minus_mom.R") test_that( "testing",{ AA <- locus( c("A","A") ) AB <- locus( c("A","B") ) BB <- locus( c("B","B") ) AC <- locus( c("A","C") ) AD <- locus( c("A","D") ) BC <- locus( c("B","C") ) BD <- locus( c("B","D") ) CC <- locus( c("C","C") ) CD <- locus( c("C","D") ) DD <- locus( c("D","D") ) loci <- c(AA,AB,AC,AD,BB,BC,BD,CD,CD,DD) offID <- c(0 ,1,2 , 3, 0, 1, 2,1, 0, 2 ) momID <- c(rep("A",4), rep("B",3), rep("C",3)) df <- data.frame( ID=factor(momID), OffID=factor(offID), TPI=loci ) expect_that( minus_mom("A"), throws_error() ) expect_that( minus_mom(data.frame(x=3)), throws_error() ) expect_that( minus_mom( df, "Bob"), throws_error() ) expect_that( minus_mom( df,"ID","Bob"), throws_error() ) mm <- minus_mom( df ) expect_that( mm, is_a("data.frame") ) expect_that( dim(mm), is_equivalent_to( c(7,3) ) ) expect_that( names(mm), is_equivalent_to( c("ID","OffID","TPI")) ) expect_that( as.character(mm$TPI), is_equivalent_to(c("B","C","D","C","D","C:D","D"))) })