source('../gsDesign_independent_code.R') ################################################# # Test plotHR function ################################################# ## For comparing floating-point numbers, an exact match cannot be expected. ## For such test cases,the tolerance is set to 1e-6 (= 0.000001), a sufficiently ## low value. xgs <- gsSurv(lambdaC = 0.2, hr = 0.5, eta = 0.1, T = 2, minfup = 1.5) pltobj <- plotHR(xgs) nexp <- xgs$n.I test_that( desc = "checking number of events", code = { nobs <- subset(pltobj$data, Bound == "Upper")$N expect_lte(abs(nobs[1] - nexp[1]), 1e-6) expect_lte(abs(nobs[2] - nexp[2]), 1e-6) expect_lte(abs(nobs[3] - nexp[3]), 1e-6) } ) HRUobs <- subset(pltobj$data, Bound == "Upper")$Z HRUexp <- zn2hr(z = xgs$upper$bound, n = nexp) test_that( desc = "Check HR for upper boundary.", code = { expect_lte(abs(HRUobs[1] - HRUexp[1]), 1e-6) expect_lte(abs(HRUobs[2] - HRUexp[2]), 1e-6) expect_lte(abs(HRUobs[3] - HRUexp[3]), 1e-6) } ) HRLobs <- subset(pltobj$data, Bound == "Lower")$Z HRLexp <- zn2hr(z = xgs$lower$bound, n = nexp) test_that( desc = "Check HR for Lower boundary.", code = { expect_lte(abs(HRLobs[1] - HRLexp[1]), 1e-6) expect_lte(abs(HRLobs[2] - HRLexp[2]), 1e-6) expect_lte(abs(HRLobs[3] - HRLexp[3]), 1e-6) } ) test_that("Test plotHR graphs are correctly rendered ", { save_plot_obj <- save_gg_plot(plotHR(xgs)) local_edition(3) expect_snapshot_file(save_plot_obj, "plot_plotHR_1.png") })