* using log directory ‘/srv/hornik/tmp/CRAN/grpCox.Rcheck’ * using R Under development (unstable) (2023-12-09 r85665) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.5 (1) Debian flang-new version 17.0.5 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘grpCox/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘grpCox’ version ‘1.0.2’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Xuan Dang ’ Unknown, possibly misspelled, fields in DESCRIPTION: ‘Roxygen2’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘grpCox’ can be installed ... [15s/15s] WARNING Found the following significant warnings: RcppExports.cpp:45:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:83:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:123:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:163:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:197:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:231:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:265:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:299:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:334:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:374:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] RcppExports.cpp:415:18: warning: format string is not a string literal (potentially insecure) [-Wformat-security] See ‘/srv/hornik/tmp/CRAN/grpCox.Rcheck/00install.out’ for details. * used C++ compiler: ‘Debian clang version 17.0.5 (1)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s/6s] NOTE Found if() conditions comparing class() to string: File ‘grpCox/R/grpCoxPrep.R’: if (class(group) != "list") ... Use inherits() (or maybe is()) instead. * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [2s/2s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 2 NOTEs