test_that("hmp.u01.gc.coarse bundled object is internally consistent", { env <- new.env(parent = emptyenv()) data("hmp.u01.gc.coarse", package = "grip", envir = env) obj <- get("hmp.u01.gc.coarse", envir = env, inherits = FALSE) expect_type(obj, "list") expect_true(all(c("adj_list", "weight_list", "vertex_data", "graph_info") %in% names(obj))) n <- length(obj$adj_list) expect_equal(n, 1828L) expect_equal(length(obj$weight_list), n) expect_equal(nrow(obj$vertex_data), n) degs <- vapply(obj$adj_list, length, integer(1)) wlen <- vapply(obj$weight_list, length, integer(1)) expect_equal(degs, wlen) info <- obj$graph_info expect_equal(info$selected_k, 3L) expect_equal(info$original_vertices, 6474L) expect_equal(info$coarse_vertices, 1828L) expect_equal(info$edge_count, 4656L) }) test_that("bundled HMP/U01 vignette results are available and well formed", { path <- system.file( "extdata", "hmp_u01_gc_coarse", "vignette_results.rds", package = "grip" ) expect_true(nzchar(path)) expect_true(file.exists(path)) res <- readRDS(path) expect_true(all(c("preset_summary", "local_search_summary", "layouts") %in% names(res))) expect_true(all(c("default", "tree", "torus") %in% names(res$layouts$preset))) expect_true(nrow(res$preset_summary) >= 3L) expect_true(nrow(res$local_search_summary) >= 2L) })