R Under development (unstable) (2024-01-07 r85787 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(greatR) > data.table::setDTthreads(2) # Only needed to avoid issues on CRAN > > test_check("greatR", reporter = c("progress", "list", "fail")) ✔ | F W S OK | Context ⠏ | 0 | dynamics i Will process 1 gene. i Using estimated standard deviation, as no `exp_sd` was provided. ⠹ | 3 | dynamics ⠸ | 4 | dynamics ✔ | 4 | dynamics ⠏ | 0 | optimisation ℹ Will process 1 gene. ℹ Using estimated standard deviation, as no `exp_sd` was provided. ⠹ | 3 | optimisation ✔ | 4 | optimisation ⠏ | 0 | registration i Will process 10 genes. i Using estimated standard deviation, as no `exp_sd` was provided. i Will process 10 genes. i Using estimated standard deviation, as no `exp_sd` was provided. i Will process 10 genes. i Using estimated standard deviation, as no `exp_sd` was provided. ⠸ | 4 | registration i Will process 1 gene. i Using estimated standard deviation, as no `exp_sd` was provided. ⠼ | 15 | registration ⠴ | 16 | registration ⠏ | 20 | registration ⠋ | 21 | registration -- Validating input data ------------------------------------------------------- ⠦ | 27 | registration ✔ | 27 | registration [1.0s] ⠏ | 0 | results ⠸ | 4 | results ⠋ | 11 | results ⠙ | 12 | results ⠼ | 15 | results ✔ | 20 | results ⠏ | 0 | utils-calcs ℹ Using estimated standard deviation, as no `exp_sd` was provided. i Using estimated standard deviation, as no `exp_sd` was provided. i Using estimated standard deviation, as no `exp_sd` was provided. ✔ | 10 | utils-calcs ⠏ | 0 | utils ℹ Will process 1 gene. ℹ Using estimated standard deviation, as no `exp_sd` was provided. ⠙ | 2 | utils ⠙ | 12 | utils ⠦ | 27 | utils ✔ | 40 | utils ══ Results ═════════════════════════════════════════════════════════════════════ Duration: 3.7 s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 105 ] > > proc.time() user system elapsed 3.85 0.39 4.23