downloading reverse dependencies ... downloading incidence2_2.6.3.tar.gz ... ok downloading atime_2025.5.24.tar.gz ... ok installing dependencies ‘binsegRcpp’, ‘ciTools’, ‘cumstats’, ‘fastymd’, ‘fpop’, ‘grates’, ‘LOPART’, ‘nc’, ‘PeakSegDisk’, ‘re2’, ‘wbs’, ‘ympes’ Warning: package ‘cumstats’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages begin installing package ‘fastymd’ begin installing package ‘ympes’ begin installing package ‘ciTools’ begin installing package ‘re2’ begin installing package ‘binsegRcpp’ begin installing package ‘wbs’ begin installing package ‘fpop’ begin installing package ‘PeakSegDisk’ begin installing package ‘LOPART’ begin installing package ‘nc’ * installing *source* package ‘ympes’ ... ** this is package ‘ympes’ version ‘1.9.0’ ** package ‘ympes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ympes) * installing *source* package ‘fastymd’ ... ** this is package ‘fastymd’ version ‘0.1.3’ ** package ‘fastymd’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1S9OMN/R.INSTALL2c665b223c7902/fastymd/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c api.c -o api.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c civil_from_days.c -o civil_from_days.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c days_from_civil.c -o days_from_civil.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c epochdays.c -o epochdays.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o fastymd.so api.o civil_from_days.o days_from_civil.o epochdays.o init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1S9OMN/R.INSTALL2c665b223c7902/fastymd/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastymd/00new/fastymd/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastymd) begin installing package ‘grates’ * installing *source* package ‘wbs’ ... ** this is package ‘wbs’ version ‘1.4.1’ ** package ‘wbs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpp6cDhb/R.INSTALL2c66691aed2fca/wbs/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wbs.c -o wbs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wbs_init.c -o wbs_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o wbs.so wbs.o wbs_init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpp6cDhb/R.INSTALL2c66691aed2fca/wbs/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-wbs/00new/wbs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wbs) * installing *source* package ‘nc’ ... ** this is package ‘nc’ version ‘2025.3.24’ ** package ‘nc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nc) * installing *source* package ‘PeakSegDisk’ ... ** this is package ‘PeakSegDisk’ version ‘2024.10.1’ ** package ‘PeakSegDisk’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpW6DblR/R.INSTALL2c6667107d0c9b/PeakSegDisk/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PeakSegFPOPLog.cpp -o PeakSegFPOPLog.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c funPieceListLog.cpp -o funPieceListLog.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o PeakSegDisk.so PeakSegFPOPLog.o funPieceListLog.o interface.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpW6DblR/R.INSTALL2c6667107d0c9b/PeakSegDisk/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-PeakSegDisk/00new/PeakSegDisk/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PeakSegDisk) * installing *source* package ‘fpop’ ... ** this is package ‘fpop’ version ‘2019.08.26’ ** package ‘fpop’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLuhyuG/R.INSTALL2c666d514a2b71/fpop/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c BinSeg_MultiDim.cpp -o BinSeg_MultiDim.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Call_BinSeg_MultiDim.cpp -o Call_BinSeg_MultiDim.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Heap.cpp -o Heap.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Node.cpp -o Node.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Rwrappers.cc -o Rwrappers.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c colibri.cc -o colibri.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c liste.cc -o liste.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o fpop.so BinSeg_MultiDim.o Call_BinSeg_MultiDim.o Heap.o Node.o Rwrappers.o colibri.o liste.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLuhyuG/R.INSTALL2c666d514a2b71/fpop/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fpop/00new/fpop/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fpop) * installing *source* package ‘grates’ ... ** this is package ‘grates’ version ‘1.6.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (grates) * installing *source* package ‘LOPART’ ... ** this is package ‘LOPART’ version ‘2024.6.19’ ** package ‘LOPART’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3I5qM4/R.INSTALL2c6665573c803f/LOPART/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LOPART.cpp -o LOPART.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o LOPART.so LOPART.o RcppExports.o interface.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3I5qM4/R.INSTALL2c6665573c803f/LOPART/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-LOPART/00new/LOPART/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LOPART) * installing *source* package ‘ciTools’ ... ** this is package ‘ciTools’ version ‘0.6.1’ ** package ‘ciTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ciTools) * installing *source* package ‘binsegRcpp’ ... ** this is package ‘binsegRcpp’ version ‘2025.5.13’ ** package ‘binsegRcpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6ETn7L/R.INSTALL2c666c672278cd/binsegRcpp/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PiecewiseFunction.cpp -o PiecewiseFunction.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c binseg.cpp -o binseg.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cum_median.cpp -o cum_median.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c depth_first.cpp -o depth_first.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o binsegRcpp.so PiecewiseFunction.o RcppExports.o binseg.o cum_median.o depth_first.o interface.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6ETn7L/R.INSTALL2c666c672278cd/binsegRcpp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-binsegRcpp/00new/binsegRcpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (binsegRcpp) * installing *source* package ‘re2’ ... ** this is package ‘re2’ version ‘0.1.4’ ** package ‘re2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-1) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMikiTj/R.INSTALL2c66632729a942/re2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/util/rune.cc -o re2google/util/rune.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/util/strutil.cc -o re2google/util/strutil.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/bitstate.cc -o re2google/re2/bitstate.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/compile.cc -o re2google/re2/compile.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/dfa.cc -o re2google/re2/dfa.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/filtered_re2.cc -o re2google/re2/filtered_re2.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/mimics_pcre.cc -o re2google/re2/mimics_pcre.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/nfa.cc -o re2google/re2/nfa.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/onepass.cc -o re2google/re2/onepass.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/parse.cc -o re2google/re2/parse.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/perl_groups.cc -o re2google/re2/perl_groups.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prefilter.cc -o re2google/re2/prefilter.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prefilter_tree.cc -o re2google/re2/prefilter_tree.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prog.cc -o re2google/re2/prog.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/re2.cc -o re2google/re2/re2.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/regexp.cc -o re2google/re2/regexp.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/set.cc -o re2google/re2/set.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/simplify.cc -o re2google/re2/simplify.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/stringpiece.cc -o re2google/re2/stringpiece.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/tostring.cc -o re2google/re2/tostring.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/unicode_casefold.cc -o re2google/re2/unicode_casefold.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/unicode_groups.cc -o re2google/re2/unicode_groups.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_re2proxy.cpp -o re2_re2proxy.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_regexp.cpp -o re2_regexp.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_do_match.cpp -o re2_do_match.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_locate.cpp -o re2_locate.o re2_locate.cpp: In member function ‘virtual void {anonymous}::DoLocateAll::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_locate.cpp:74:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 74 | for (int row = 0; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_get_options.cpp -o re2_get_options.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_match.cpp -o re2_match.o re2_match.cpp: In member function ‘virtual void {anonymous}::DoMatchAll::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_match.cpp:143:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 143 | for (int row = 0; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_detect.cpp -o re2_detect.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_match_cpp.cpp -o re2_match_cpp.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_split.cpp -o re2_split.o re2_split.cpp: In member function ‘virtual void {anonymous}::DoSplit::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_split.cpp:36:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 36 | for (; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_extract_replace.cpp -o re2_extract_replace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_replace.cpp -o re2_replace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_quote_meta.cpp -o re2_quote_meta.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_max_submatch.cpp -o re2_max_submatch.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_capturing_group.cpp -o re2_capturing_group.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_random_text.cpp -o re2_random_text.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o re2.so re2google/util/rune.o re2google/util/strutil.o re2google/re2/bitstate.o re2google/re2/compile.o re2google/re2/dfa.o re2google/re2/filtered_re2.o re2google/re2/mimics_pcre.o re2google/re2/nfa.o re2google/re2/onepass.o re2google/re2/parse.o re2google/re2/perl_groups.o re2google/re2/prefilter.o re2google/re2/prefilter_tree.o re2google/re2/prog.o re2google/re2/re2.o re2google/re2/regexp.o re2google/re2/set.o re2google/re2/simplify.o re2google/re2/stringpiece.o re2google/re2/tostring.o re2google/re2/unicode_casefold.o re2google/re2/unicode_groups.o RcppExports.o re2_re2proxy.o re2_regexp.o re2_do_match.o re2_locate.o re2_get_options.o re2_match.o re2_detect.o re2_match_cpp.o re2_split.o re2_extract_replace.o re2_replace.o re2_quote_meta.o re2_max_submatch.o re2_capturing_group.o re2_random_text.o -pthread -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMikiTj/R.INSTALL2c66632729a942/re2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-re2/00new/re2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (re2) checking grates_1.6.0.tar.gz ... checking incidence2_2.6.3.tar.gz ... checking atime_2025.5.24.tar.gz ... Depends: Package: grates Depends: R (>= 3.6.0) Imports: utils, fastymd Timings: user system elapsed grates 44.11 4.262 41.803 Results: Check status summary: OK Source packages 1 Reverse depends 2 Check results summary: grates ... OK rdepends_atime ... OK rdepends_incidence2 ... OK