* using log directory 'd:/RCompile/CRANincoming/R-devel/graphicalMCP.Rcheck'
* using R Under development (unstable) (2024-06-30 r86854 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'graphicalMCP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graphicalMCP' version '0.2.1'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Dong Xi <dong.xi1@gilead.com>'

New submission

Possibly misspelled words in DESCRIPTION:
  MCPs (10:56, 13:33, 14:71)
  familywise (11:9)

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graphicalMCP' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
  'cran-comments.md'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) as_graph.Rd:66: Lost braces
    66 | Cs{\'a}rdi, G., Nepusz, T., Traag, V., Horv{\'a}t, S., Zanini, F., Noom, D.,
       |   ^
checkRd: (-1) as_graph.Rd:66: Lost braces
    66 | Cs{\'a}rdi, G., Nepusz, T., Traag, V., Horv{\'a}t, S., Zanini, F., Noom, D.,
       |                                            ^
checkRd: (-1) as_graph.Rd:67: Lost braces
    67 | and M{\"u}ller, K. (2024). \emph{igraph}: Network analysis and visualization
       |      ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [17s] NOTE
Examples with CPU (user + system) or elapsed time > 10s
                      user system elapsed
graph_calculate_power 9.94   0.17   10.11
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [36s] OK
  Running 'testthat.R' [36s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [298s] OK
* checking PDF version of manual ... [14s] OK
* checking HTML version of manual ... OK
* DONE
Status: 4 NOTEs