test_that("Mixed effects ANOVA table - defaults", { mmod1 <- mixed_anova(data_2w_Festing, #fit with grafify call "GST", c("Treatment", "Strain"), "Block") mmod2 <- anova(lmerTest::lmer(GST ~ Treatment*Strain + #fit with native call (1|Block), data = data_2w_Festing), type = "II", #default in grafify ddf = "Kenward-Roger") #default in grafify expect_equal(mmod1$`Sum Sq`, mmod2$`Sum Sq`) #check some cells in ANOVA table expect_equal(mmod1$`F value`, mmod2$`F value`) expect_equal(mmod1$`Pr(>F)`[1], mmod2$`Pr(>F)`[1]) }) test_that("Mixed effects ANOVA table - custom", { mmod3 <- mixed_anova(data_2w_Festing, #grafify call "GST", c("Treatment", "Strain"), "Block", Df_method = "Satterthwaite") #change ddf method mmod4 <- anova(lmerTest::lmer(GST ~ Treatment*Strain + #native call (1|Block), data = data_2w_Festing), type = "II", ddf = "Satterthwaite") #change ddf method expect_equal(mmod3$`Sum Sq`, mmod4$`Sum Sq`) #check cells from ANOVA table expect_equal(mmod3$`F value`, mmod4$`F value`) expect_equal(mmod3$`Pr(>F)`[1], mmod4$`Pr(>F)`[1]) expect_equal(class(mmod3), class(mmod4)) })