* using log directory ‘/srv/hornik/tmp/CRAN/gpuR.Rcheck’ * using R Under development (unstable) (2024-04-02 r86304) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (5) Debian flang-new version 17.0.6 (5) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * using option ‘--no-tests’ * checking for file ‘gpuR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘gpuR’ version ‘2.0.4’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/6s] NOTE Maintainer: ‘Patrick Brown ’ New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: OpenCL (7:65) gpu (5:31) vcl (5:40) CRAN repository db overrides: X-CRAN-Comment: Archived on 2020-06-02 as check problems were not corrected despite reminders. * checking package namespace information ... OK * checking package dependencies ... NOTE Packages in Depends/Imports which should probably only be in LinkingTo: ‘BH’ ‘RcppEigen’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘gpuR’ can be installed ... [344s/344s] WARNING Found the following significant warnings: ../inst/include/gpuR/dynEigenMat.hpp:269:49: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] ../inst/include/gpuR/dynEigenMat.hpp:291:49: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] ../inst/include/gpuR/dynEigenMat.hpp:314:58: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] ../inst/include/gpuR/dynEigenMat.hpp:333:58: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] ../inst/include/gpuR/dynEigenVec.hpp:165:76: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:78:82: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:240:91: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:297:82: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:680:43: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1021:76: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1047:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1070:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1093:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1117:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1141:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1164:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1188:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1212:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1235:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1259:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1282:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1308:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1332:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1355:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas1.cpp:1378:70: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas3.cpp:47:41: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas3.cpp:72:41: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas3.cpp:97:41: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_blas3.cpp:119:41: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_eigen.cpp:47:53: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:47:50: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:71:49: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:96:50: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:121:49: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:244:69: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:247:49: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:248:46: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:288:69: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:291:48: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:292:50: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:293:46: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:294:47: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:342:69: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:345:48: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:346:45: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:386:69: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:389:48: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:390:50: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:391:46: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:392:47: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:431:92: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:444:100: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:453:89: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:491:92: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:500:75: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:501:75: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:505:95: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:506:95: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:512:102: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:521:81: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:522:81: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:578:89: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:646:91: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:647:91: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:648:93: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] vienna_stats.cpp:649:93: warning: explicitly assigning value of variable of type 'viennacl::context' to itself [-Wself-assign-overloaded] See ‘/srv/hornik/tmp/CRAN/gpuR.Rcheck/00install.out’ for details. * used C++ compiler: ‘Debian clang version 17.0.6 (5)’ * checking C++ specification ... NOTE Specified C++11: please drop specification unless essential * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/10s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) grapes-times-grapes-methods.Rd:22-49: Lost braces 22 | as.vclVector.vclMatrix <- function(data, shared = FALSE, ...){ | ^ checkRd: (-1) pmin.vclVector.Rd:21-24: Lost braces 21 | function(..., na.rm = FALSE){ | ^ checkRd: (-1) pmin.vclVector.Rd:30-32: Lost braces 30 | function(..., na.rm = FALSE){ | ^ checkRd: (-1) pmin.vclVector.Rd:37-39: Lost braces 37 | function(..., na.rm = FALSE){ | ^ checkRd: (-1) pmin.vclVector.Rd:44-46: Lost braces 44 | function(..., na.rm = FALSE){ | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking include directives in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [1s/1s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... SKIPPED * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [4s/4s] OK * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 4 NOTEs