set.seed(4321) x <- rnorm(15)^2 xna <- replace(x, 2, NA) w <- runif(15, 0, 2) f <- factor(sample(letters[1:3], 15, TRUE)) test_that("weights transmute correctly", { expect_equal(transmute_weights(2, 2)(x), rep(1 / 15, length(x))) expect_equal(transmute_weights(2, 2)(c(1:3, NA)), c(1, 1, 1, NA) / 3) expect_equal( transmute_weights(0, 0)(xna, w), scale_weights(replace(w, 2, NA)) ) expect_equal(transmute_weights(2, 1)(c(1, NA)), c(1, NA)) expect_equal(transmute_weights(-1, 1)(x, w), scale_weights(w / x)) expect_equal(transmute_weights(1, -1)(xna, w), scale_weights(w * xna)) expect_equal( transmute_weights(7, -3)(x, transmute_weights(-3, 7)(x, w)), scale_weights(w) ) expect_equal( grouped(transmute_weights(1, 2))(x, w, group = f), unsplit(Map(transmute_weights(1, 2), split(x, f), split(w, f)), f) ) expect_error(transmute_weights(1, 1)(1:5, 1:4)) expect_error(transmute_weights(1, 2)(1:5, 1:4)) }) test_that("contributions work correctly", { expect_equal(arithmetic_contributions(1:4), c(0, 0.25, 0.5, 0.75)) expect_equal(harmonic_contributions(1:4), c(0, 0.24, 0.32, 0.36)) expect_equal(geometric_contributions(c(1, 4)), c(0, 1)) expect_equal(sum(contributions(-3.75)(x, w)), generalized_mean(-3.75)(x, w) - 1) expect_equal(sum(contributions(3.75)(xna, w), na.rm = TRUE), generalized_mean(3.75)(xna, w, na.rm = TRUE) - 1) expect_equal( as.numeric(tapply(grouped(geometric_contributions)(x, group = f), f, sum)), as.numeric(tapply(x, f, geometric_mean) - 1) ) }) test_that("weights factor correctly", { expect_equal(factor_weights(0)(c(1, NA)), c(1, NA)) expect_equal(factor_weights(0)(x), rep(1, length(x))) expect_equal(factor_weights(0)(x, w), w) expect_equal(update_weights(xna, w), xna * w) expect_equal(grouped(update_weights)(x, w, group = f), x * w) expect_error(factor_weights(2)(1:5, 1:4)) expect_error(factor_weights(0)(1:5, 1:4)) }) test_that("weights scale correctly", { expect_equal(sum(scale_weights(w)), 1) expect_equal(scale_weights(c(1:2, NA)), c(1:2, NA) / 3) }) test_that("nested contributions work correctly", { expect_equal( sum(nested_contributions(3, c(-1, 2), c(0.75, 0.25))(x)), generalized_mean(3)( c(harmonic_mean(x), generalized_mean(2)(x)), c(0.75, 0.25) ) - 1 ) expect_equal( sum(nested_contributions2(3, c(-1, 2), c(0.75, 0.25))(x)), generalized_mean(3)( c(harmonic_mean(x), generalized_mean(2)(x)), c(0.75, 0.25) ) - 1 ) expect_equal( sum(nested_contributions(0, c(1, -1), c(0.5, 0.5))(x)), prod(sqrt(c(harmonic_mean(x), arithmetic_mean(x)))) - 1 ) expect_equal( nested_contributions(1, c(0, -1), c(1, 2))(xna, x, w), nested_contributions2(1, c(0, -1), c(1, 2))(xna, x, w) ) expect_equal( sum(nested_contributions(1, c(0, -1), c(1, 2))(xna, x, w), na.rm = TRUE), nested_mean(1, c(0, -1), c(1, 2))(xna, x, w, na.rm = TRUE) - 1 ) expect_equal( sum(nested_contributions(0, c(3, -2))(x, w, xna), na.rm = TRUE), nested_mean(0, c(3, -2))(x, w, xna, na.rm = TRUE) - 1 ) expect_equal( sum(nested_contributions2(0, c(3, -2))(x, w, xna), na.rm = TRUE), nested_mean(0, c(3, -2))(x, w, xna, na.rm = TRUE) - 1 ) expect_equal(fisher_contributions(1:2, c(NA, NA)), fisher_contributions2(1:2, c(NA, NA))) expect_equal(fisher_contributions(1:2, c(NA, NA)), harmonic_contributions(1:2)) expect_equal(nested_contributions(3, c(-1, 2), c(0.75, NA))(x), nested_contributions2(3, c(-1, 2), c(0.75, NA))(x)) expect_equal(nested_contributions(3, c(-1, 2), c(0.75, NA))(x), harmonic_contributions(x)) expect_equal(nested_contributions(3, c(2, -1), c(NA, 0.75))(x, w2 = xna), nested_contributions2(3, c(2, -1), c(NA, 0.75))(x, w2 = xna)) expect_equal(nested_contributions(3, c(2, -1), c(NA, 0.75))(x, w2 = xna), harmonic_contributions(x, xna)) expect_equal(nested_contributions(3, c(-1, 2), c(NA, NA))(x), rep(NA_real_, length(x))) expect_equal(nested_contributions2(3, c(-1, 2), c(NA, NA))(x), rep(NA_real_, length(x))) })