downloading reverse dependencies ... downloading ceterisParibus_0.6.tar.gz ... ok downloading condvis2_0.1.2.tar.gz ... ok downloading imputeGeneric_0.1.0.tar.gz ... ok downloading lime_0.5.3.tar.gz ... ok downloading live_1.5.13.tar.gz ... ok downloading radiant.multivariate_1.6.6.tar.gz ... ok downloading recipes_1.1.0.tar.gz ... ok downloading simputation_0.2.8.tar.gz ... ok downloading themis_1.0.2.tar.gz ... ok downloading aqp_2.1.0.tar.gz ... ok downloading CAST_1.0.2.tar.gz ... ok downloading counterfactuals_0.1.6.tar.gz ... ok downloading DALEX_2.4.3.tar.gz ... ok downloading iml_0.11.3.tar.gz ... ok downloading ingredients_2.3.0.tar.gz ... ok downloading sharpshootR_2.3.2.tar.gz ... ok downloading yaImpute_1.0-34.1.tar.gz ... ok installing dependencies ‘ALEPlot’, ‘aqp’, ‘breakDown’, ‘ccaPP’, ‘daymetr’, ‘ddalpha’, ‘DendSer’, ‘Evapotranspiration’, ‘forestmodel’, ‘geodata’, ‘glmnetUtils’, ‘Gmedian’, ‘gower’, ‘hydromad’, ‘iml’, ‘markovchain’, ‘miesmuschel’, ‘missMethods’, ‘mpspline2’, ‘PCAmixdata’, ‘radiant.data’, ‘radiant.model’, ‘rchallenge’, ‘ROSE’, ‘scagnostics’, ‘sharpshootR’, ‘soilDB’, ‘SoilTaxonomy’, ‘soiltexture’, ‘tactile’, ‘trtf’ Warning: package ‘hydromad’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘radiant.basics’, ‘NeuralNetTools’ begin installing package ‘NeuralNetTools’ begin installing package ‘DendSer’ begin installing package ‘scagnostics’ begin installing package ‘glmnetUtils’ begin installing package ‘missMethods’ begin installing package ‘breakDown’ begin installing package ‘forestmodel’ begin installing package ‘radiant.data’ begin installing package ‘ddalpha’ begin installing package ‘ROSE’ begin installing package ‘tactile’ begin installing package ‘markovchain’ begin installing package ‘Gmedian’ begin installing package ‘mpspline2’ begin installing package ‘soiltexture’ begin installing package ‘geodata’ begin installing package ‘PCAmixdata’ begin installing package ‘iml’ begin installing package ‘trtf’ begin installing package ‘miesmuschel’ begin installing package ‘rchallenge’ begin installing package ‘ALEPlot’ begin installing package ‘aqp’ begin installing package ‘daymetr’ begin installing package ‘Evapotranspiration’ begin installing package ‘SoilTaxonomy’ begin installing package ‘ccaPP’ begin installing package ‘gower’ * installing *source* package ‘mpspline2’ ... ** package ‘mpspline2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mpspline2) * installing *source* package ‘daymetr’ ... ** package ‘daymetr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (daymetr) * installing *source* package ‘ROSE’ ... ** package ‘ROSE’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ROSE) * installing *source* package ‘DendSer’ ... ** package ‘DendSer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8nHn3e/R.INSTALL2d9cc56660348/DendSer/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DendSer_init.c -o DendSer_init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c carct.c -o carct.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cbar.c -o cbar.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clpl.c -o clpl.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cpl.c -o cpl.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o DendSer.so DendSer_init.o carct.o cbar.o clpl.o cpl.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8nHn3e/R.INSTALL2d9cc56660348/DendSer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DendSer/00new/DendSer/libs ** R ** demo ** byte-compile and prepare package for lazy loading Warning in seriation::set_criterion_method("dist", "BAR", criterion_method_dist_BAR, : Entry with name ‘BAR’ already exists! Modifying entry. ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DendSer) * installing *source* package ‘gower’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3TL5nN/R.INSTALL2d9d237a1e9db7/gower/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_register_native.c -o R_register_native.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gower.c -o gower.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o gower.so R_register_native.o gower.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3TL5nN/R.INSTALL2d9d237a1e9db7/gower/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-gower/00new/gower/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gower) * installing *source* package ‘rchallenge’ ... ** package ‘rchallenge’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rchallenge) * installing *source* package ‘scagnostics’ ... ** package ‘scagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scagnostics) * installing *source* package ‘ALEPlot’ ... ** package ‘ALEPlot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ALEPlot) * installing *source* package ‘missMethods’ ... ** package ‘missMethods’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (missMethods) * installing *source* package ‘tactile’ ... ** package ‘tactile’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tactile) * installing *source* package ‘SoilTaxonomy’ ... ** package ‘SoilTaxonomy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SoilTaxonomy) * installing *source* package ‘PCAmixdata’ ... ** package ‘PCAmixdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PCAmixdata) * installing *source* package ‘forestmodel’ ... ** package ‘forestmodel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestmodel) * installing *source* package ‘breakDown’ ... ** package ‘breakDown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (breakDown) * installing *source* package ‘soiltexture’ ... ** package ‘soiltexture’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soiltexture) * installing *source* package ‘glmnetUtils’ ... ** package ‘glmnetUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmnetUtils) * installing *source* package ‘NeuralNetTools’ ... ** package ‘NeuralNetTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NeuralNetTools) * installing *source* package ‘trtf’ ... ** package ‘trtf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trtf) * installing *source* package ‘Evapotranspiration’ ... ** package ‘Evapotranspiration’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Evapotranspiration) * installing *source* package ‘iml’ ... ** package ‘iml’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iml) * installing *source* package ‘radiant.data’ ... ** package ‘radiant.data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (radiant.data) begin installing package ‘radiant.basics’ * installing *source* package ‘geodata’ ... ** package ‘geodata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (geodata) * installing *source* package ‘aqp’ ... ** package ‘aqp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading in method for ‘coerce’ with signature ‘"SoilProfileCollection","tbl_df"’: no definition for class “tbl_df” in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPointsDataFrame"’: no definition for class “SpatialPointsDataFrame” in method for ‘coerce’ with signature ‘"SoilProfileCollection","sf"’: no definition for class “sf” in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPoints"’: no definition for class “SpatialPoints” Creating a generic function for ‘nrow’ from package ‘base’ in package ‘aqp’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aqp) begin installing package ‘soilDB’ * installing *source* package ‘miesmuschel’ ... ** package ‘miesmuschel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (miesmuschel) * installing *source* package ‘radiant.basics’ ... ** package ‘radiant.basics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (radiant.basics) begin installing package ‘radiant.model’ * installing *source* package ‘Gmedian’ ... ** package ‘Gmedian’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXKvTBq/R.INSTALL2d9cf360c64e9f/Gmedian/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Gmedian.cpp -o Gmedian.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RSpectra/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Weiszfeld.cpp -o Weiszfeld.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o Gmedian.so Gmedian.o RcppExports.o Weiszfeld.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXKvTBq/R.INSTALL2d9cf360c64e9f/Gmedian/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Gmedian/00new/Gmedian/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Gmedian) * installing *source* package ‘soilDB’ ... ** package ‘soilDB’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soilDB) begin installing package ‘sharpshootR’ * installing *source* package ‘sharpshootR’ ... ** package ‘sharpshootR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sharpshootR) * installing *source* package ‘ccaPP’ ... ** package ‘ccaPP’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWyfGTJ/R.INSTALL2d9d276bde5820/ccaPP/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c cca.cpp -o cca.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ccaPP_init.c -o ccaPP_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c cor.cpp -o cor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fastCorKendall.cpp -o fastCorKendall.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c utils.cpp -o utils.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o ccaPP.so cca.o ccaPP_init.o cor.o fastCorKendall.o utils.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWyfGTJ/R.INSTALL2d9d276bde5820/ccaPP/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ccaPP/00new/ccaPP/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ccaPP) * installing *source* package ‘radiant.model’ ... ** package ‘radiant.model’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (radiant.model) * installing *source* package ‘ddalpha’ ... ** package ‘ddalpha’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuPfDo1/R.INSTALL2d9ce14ba953e6/ddalpha/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c AlphaProcedure.cpp -o AlphaProcedure.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from AlphaProcedure.cpp:14: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c BandDepth.cpp -o BandDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from BandDepth.cpp:1: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /usr/include/string.h:548, from /usr/include/c++/14/cstring:43, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/core/bit.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/integer/integer_log2.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/integer_log2.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/large_arithmetic.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/const_mod.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/linear_congruential.hpp:28, from stdafx.h:24: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void BandDepth(T3DMatrix, T3DMatrix, int, int, int, int, bool, int, double*)’ at BandDepth.cpp:43:15: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Common.cpp -o Common.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Common.cpp:10: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ Common.cpp: In function ‘double determinant(bMatrix&)’: Common.cpp:164:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘boost::numeric::ublas::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 164 | for (int i = 0; i < pivots.size(); ++i) | ~~^~~~~~~~~~~~~~~ Common.cpp:166:31: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 166 | if (pivots(i) != i) | ~~~~~~~~~~^~~~ Common.cpp: In function ‘void outVector(TPoint&)’: Common.cpp:270:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 270 | for (int j = 0; j < point.size(); j++){ | ~~^~~~~~~~~~~~~~ Common.cpp: In function ‘void outMatrix(TMatrix&)’: Common.cpp:280:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 280 | for (int i = 0; i < points.size(); i++){ | ~~^~~~~~~~~~~~~~~ Common.cpp:282:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 282 | for (int j = 0; j < points[i].size(); j++){ | ~~^~~~~~~~~~~~~~~~~~ Common.cpp: In function ‘void outFeatures(Features)’: Common.cpp:294:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 294 | for (int i = 0; i < fs.size(); i++){ | ~~^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c DKnn.cpp -o DKnn.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from DKnn.cpp:10: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ DKnn.cpp: In function ‘void knnGetClasses(TDMatrix, int*, int, int, int, TDMatrix, int, int, bool, int, int*)’: DKnn.cpp:76:28: warning: ‘ptPrjDepths’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:64:18: note: ‘ptPrjDepths’ was declared here 64 | TDMatrix ptPrjDepths; if (depthType == 1) ptPrjDepths = newM(ndir, 1); | ^~~~~~~~~~~ DKnn.cpp:76:28: warning: ‘prjs’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:63:18: note: ‘prjs’ was declared here 63 | TDMatrix prjs; if (depthType == 1) prjs = newM(ndir, nlearn * 2); | ^~~~ DKnn.cpp:76:28: warning: ‘dirs’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:62:18: note: ‘dirs’ was declared here 62 | TDMatrix dirs; if (depthType == 1) dirs = newM(ndir, d); | ^~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c HD.cpp -o HD.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from HD.cpp:12: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Knn.cpp -o Knn.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Knn.cpp:10: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c LensDepth.cpp -o LensDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from LensDepth.cpp:15: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Mahalanobis.cpp -o Mahalanobis.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Mahalanobis.cpp:2: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ Mahalanobis.cpp: In function ‘void MahalanobisDepth(TDMatrix, TDMatrix, int, int, int, double, double*)’: Mahalanobis.cpp:32:13: warning: unused variable ‘res’ [-Wunused-variable] 32 | int res = lu_factorize(A, pm); | ^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c OjaDepth.cpp -o OjaDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from OjaDepth.cpp:1: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Polynomial.cpp -o Polynomial.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Polynomial.cpp:14: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ Polynomial.cpp: In function ‘TPoint PolynomialLearnCV(TDMatrix, int, int, int, int, int*, int*)’: Polynomial.cpp:396:25: warning: unused variable ‘tmp’ [-Wunused-variable] 396 | for (int i = 0, tmp; i < numPoints; i++){ input2[i][0] = input[i][1]; input2[i][1] = input[i][0]; } // swap columns | ^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c PotentialDepth.cpp -o PotentialDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from PotentialDepth.cpp:1: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ PotentialDepth.cpp: In function ‘double EuclidianDistance(TPoint&, TPoint&)’: PotentialDepth.cpp:5:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5 | for (int i = 0; i < x.size(); i++){ | ~~^~~~~~~~~~ PotentialDepth.cpp: In function ‘double EuclidianDistance2(TPoint&, TPoint&)’: PotentialDepth.cpp:13:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 13 | for (int i = 0; i< x.size(); i++){ | ~^~~~~~~~~~ PotentialDepth.cpp: In function ‘void PotentialDepths(TMatrix&, TVariables&, TMatrix&, TMatrix&, double (*)(TPoint&, TPoint&, double), double, int)’: PotentialDepth.cpp:60:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 60 | for (int i = 0; i < cardinalities.size(); classBeginning += cardinalities[i], i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:67:60: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} [-Wsign-compare] 67 | else if (classPointsDepths->size() < cardinalities[i]) PotentialDepth.cpp:76:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 76 | for (int p = 0; p < testpoints.size(); p++){ | ~~^~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:96:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int p = 0; p < testpoints.size(); p++){ | ~~^~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:65:25: warning: ‘classPointsDepths’ may be used uninitialized [-Wmaybe-uninitialized] 65 | if (!classPointsDepths) | ^~ PotentialDepth.cpp:56:17: note: ‘classPointsDepths’ was declared here 56 | TPoint* classPointsDepths; | ^~~~~~~~~~~~~~~~~ PotentialDepth.cpp:63:25: warning: ‘classPoints’ may be used uninitialized [-Wmaybe-uninitialized] 63 | if (classPoints) delete[] classPoints; | ^~ PotentialDepth.cpp:55:18: note: ‘classPoints’ was declared here 55 | TMatrix* classPoints; | ^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ProjectionDepth.cpp -o ProjectionDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ProjectionDepth.cpp:14: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ ProjectionDepth.cpp:21:12: warning: ‘int CompareDec(OrderRec, OrderRec)’ defined but not used [-Wunused-function] 21 | static int CompareDec(OrderRec x, OrderRec y) | ^~~~~~~~~~ ProjectionDepth.cpp:16:12: warning: ‘int CompareAsc(OrderRec, OrderRec)’ defined but not used [-Wunused-function] 16 | static int CompareAsc(OrderRec x, OrderRec y) | ^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c SimplicialDepth.cpp -o SimplicialDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from SimplicialDepth.cpp:2: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ SimplicialDepth.cpp: In function ‘void SimplicialDepthsEx(TDMatrix, TDMatrix, int, int, int, double*)’: SimplicialDepth.cpp:46:22: warning: unused variable ‘sc’ [-Wunused-variable] 46 | bool sc = numSimplicesChecked == div0; | ^~ SimplicialDepth.cpp: In function ‘long long unsigned int intSD2(double**, int)’: SimplicialDepth.cpp:153:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long long unsigned int’ [-Wsign-compare] 153 | for (int i = nh; i < nn; i++) { | ~~^~~~ SimplicialDepth.cpp:154:27: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 154 | while ((j <= nh - 1) && (alpha[j] + M_PI <= alpha[i] - eps)) j++; | ~~^~~~~~~~~ In file included from /usr/include/string.h:548, from /usr/include/c++/14/cstring:43, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/core/bit.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/integer/integer_log2.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/integer_log2.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/large_arithmetic.hpp:19, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/detail/const_mod.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/random/linear_congruential.hpp:28, from stdafx.h:24: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void SimplicialDepthsEx(TDMatrix, TDMatrix, int, int, int, double*)’ at SimplicialDepth.cpp:36:10: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void SimplicialDepthsApx(TDMatrix, TDMatrix, int, int, int, long long unsigned int, double*)’ at SimplicialDepth.cpp:98:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c TukeyDepth.cpp -o TukeyDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from TukeyDepth.cpp:14: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ZonoidDepth.cpp -o ZonoidDepth.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ZonoidDepth.cpp:15: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ ZonoidDepth.cpp: In function ‘double ZonoidDepth(std::vector >&, TPoint&, int&)’: ZonoidDepth.cpp:403:21: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 403 | if (x_sort.size() == n) { /* Allocation successful. */ | ~~~~~~~~~~~~~~^~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c asa047.cpp -o asa047.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ddalpha.cpp -o ddalpha.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ddalpha.cpp:14: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ ddalpha.cpp: In function ‘void AlphaLearn(double*, int*, int*, int*, int*, int*, double*)’: ddalpha.cpp:295:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 295 | for (int i = 0; i < direction.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~ ddalpha.cpp: In function ‘void AlphaLearnCV(double*, int*, int*, int*, int*, int*, int*, int*, double*)’: ddalpha.cpp:314:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 314 | for (int i = 0; i < direction.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~ ddalpha.cpp: In function ‘void AlphaClassify(double*, int*, int*, int*, double*, int*)’: ddalpha.cpp:330:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 330 | for (int i = 0; i < _x[0].size(); i++){ | ~~^~~~~~~~~~~~~~ gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c depth.fd.f -o depth.fd.o depth.fd.f:119:28: 119 | integer I,J,K,OM(NR),L | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] depth.fd.f:119:26: 119 | integer I,J,K,OM(NR),L | 1 Warning: Unused variable ‘om’ declared at (1) [-Wunused-variable] depth.fd.f:1169:25: 1169 | INTEGER hF(N),I,J,K | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] depth.fd.f:1203:25: 1203 | INTEGER hF(N),I,J,K | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] depth.fd.f:241:24: 241 | INTEGER FUNCTION K(M,J) | ^ Warning: ‘__result_k’ may be used uninitialized [-Wmaybe-uninitialized] gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c stdafx.cpp -o stdafx.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from stdafx.cpp:5: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/traits.hpp:21, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:27: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:111:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 111 | public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from stdafx.h:15: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:149:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 149 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/BH/include/boost/numeric/ublas/detail/iterator.hpp:204:21: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 204 | public std::iterator { | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o ddalpha.so AlphaProcedure.o BandDepth.o Common.o DKnn.o HD.o Knn.o LensDepth.o Mahalanobis.o OjaDepth.o Polynomial.o PotentialDepth.o ProjectionDepth.o SimplicialDepth.o TukeyDepth.o ZonoidDepth.o asa047.o ddalpha.o depth.fd.o init.o stdafx.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuPfDo1/R.INSTALL2d9ce14ba953e6/ddalpha/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ddalpha/00new/ddalpha/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ddalpha) * installing *source* package ‘markovchain’ ... ** package ‘markovchain’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptAgdgZ/R.INSTALL2d9cf83b45846/markovchain/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c classesAndMethods.cpp -o classesAndMethods.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ctmcClassesAndMethods.cpp -o ctmcClassesAndMethods.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ctmcFittingFunctions.cpp -o ctmcFittingFunctions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c ctmcProbabilistic.cpp -o ctmcProbabilistic.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fitHigherOrder.cpp -o fitHigherOrder.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fittingFunctions.cpp -o fittingFunctions.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/tbb.h:32, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel/TBB.h:10, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel.h:24, from fittingFunctions.cpp:6: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]’: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here 291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL ) | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/tbb/atomic.h:544:12: warning: casting ‘tbb::interface5::internal::hash_map_base::bucket*’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel/TinyThread.h:7, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel.h:6: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel/Common.h: In instantiation of ‘int RcppParallel::resolveValue(const char*, T, U) [with T = long unsigned int; U = int]’: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel.h:60:28: required from ‘void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = MCList; std::size_t = long unsigned int]’ 60 | grainSize = resolveValue("RCPP_PARALLEL_GRAIN_SIZE", grainSize, 1); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fittingFunctions.cpp:433:17: required from here 433 | parallelReduce(0, n, mcList); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 16 | if (requestedValue != defaultValue && requestedValue > 0) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c multinomCI.cpp -o multinomCI.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c probabilistic.cpp -o probabilistic.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c utils.cpp -o utils.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o markovchain.so RcppExports.o classesAndMethods.o ctmcClassesAndMethods.o ctmcFittingFunctions.o ctmcProbabilistic.o fitHigherOrder.o fittingFunctions.o multinomCI.o probabilistic.o utils.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptAgdgZ/R.INSTALL2d9cf83b45846/markovchain/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-markovchain/00new/markovchain/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘sort’ in package ‘markovchain’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (markovchain) checking gower_1.0.2.tar.gz ... checking ceterisParibus_0.6.tar.gz ... checking condvis2_0.1.2.tar.gz ... checking imputeGeneric_0.1.0.tar.gz ... checking lime_0.5.3.tar.gz ... checking live_1.5.13.tar.gz ... checking radiant.multivariate_1.6.6.tar.gz ... checking recipes_1.1.0.tar.gz ... checking themis_1.0.2.tar.gz ... checking simputation_0.2.8.tar.gz ... checking aqp_2.1.0.tar.gz ... checking CAST_1.0.2.tar.gz ... checking counterfactuals_0.1.6.tar.gz ... checking DALEX_2.4.3.tar.gz ... checking iml_0.11.3.tar.gz ... checking ingredients_2.3.0.tar.gz ... checking sharpshootR_2.3.2.tar.gz ... checking yaImpute_1.0-34.1.tar.gz ... Depends: Timings: user system elapsed gower 34.034 4.346 43.431 Results: Check status summary: ERROR NOTE OK Source packages 0 1 0 Reverse depends 1 3 13 Check results summary: gower ... NOTE * checking tests ... [5s/2s] NOTE rdepends_aqp ... OK rdepends_CAST ... NOTE * checking Rd cross-references ... NOTE rdepends_ceterisParibus ... OK rdepends_condvis2 ... OK rdepends_counterfactuals ... OK rdepends_DALEX ... NOTE * checking Rd files ... [1s/1s] NOTE * checking Rd cross-references ... NOTE rdepends_iml ... OK rdepends_imputeGeneric ... OK rdepends_ingredients ... OK rdepends_lime ... OK rdepends_live ... OK rdepends_radiant.multivariate ... OK rdepends_recipes ... OK rdepends_sharpshootR ... OK rdepends_simputation ... ERROR * checking tests ... [1s/2s] ERROR rdepends_themis ... NOTE * checking Rd cross-references ... NOTE rdepends_yaImpute ... OK Check results changes: Package: simputation Check: tests New result: ERROR