* using log directory 'd:/RCompile/CRANincoming/R-devel/globalKinhom.Rcheck' * using R Under development (unstable) (2024-07-05 r86874 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'globalKinhom/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'globalKinhom' version '0.1.8' * package encoding: UTF-8 * checking CRAN incoming feasibility ... Note_to_CRAN_maintainers Maintainer: 'Thomas Shaw ' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'globalKinhom' can be installed ... OK * used C compiler: 'gcc.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... WARNING Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Execution halted A namespace must be able to be loaded with just the base namespace loaded: otherwise if the namespace gets loaded by a saved object, the session will be unable to start. Probably some imports need to be declared in the NAMESPACE file. * checking whether the namespace can be unloaded cleanly ... WARNING Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Execution halted * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted * checking S3 generic/method consistency ... WARNING Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted See section 'Generic functions and methods' in the 'Writing R Extensions' manual. * checking replacement functions ... WARNING Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted The argument of a replacement function which corresponds to the right hand side must be named 'value'. * checking foreign function calls ... NOTE Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted See chapter 'System and foreign language interfaces' in the 'Writing R Extensions' manual. * checking R code for possible problems ... NOTE Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Execution halted Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE Error: object 'integral' not found whilst loading namespace 'spatstat.explore' Call sequence: 7: stop(gettextf("object '%s' not found whilst loading namespace '%s'", genname, package), call. = FALSE, domain = NA) 6: .registerS3method(fin[i, 1], fin[i, 2], fin[i, 3], fin[i, 4], env) 5: registerS3methods(nsInfo$S3methods, package, env) 4: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 3: asNamespace(ns) 2: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) 1: loadNamespace(package, lib.loc) Execution halted The \usage entries for S3 methods should use the \method markup and not their full name. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual. * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [12s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [28s] OK Running 'tests.R' [28s] Comparing 'tests.Rout' to 'tests.Rout.save' ...4,5c4 < spatstat.univar 3.0-0 < spatstat.geom 3.3-1 --- > spatstat.geom 3.2-9 7,13d5 < < Attaching package: 'spatstat.random' < < The following object is masked from 'package:spatstat.univar': < < indefinteg < 15,25d6 < < Attaching package: 'spatstat.explore' < < The following objects are masked from 'package:spatstat.univar': < < CDF, CDF.density, StieltjesCalc, StieltjesCalc.stepfun, bw.abram, < densityAdaptiveKernel, dkernel, kaplan.meier, kernel.factor, < kernel.moment, kernel.squint, km.rs, km.rs.opt, match.kernel, < pkernel, qkernel, quantile.density, reduced.sample, rkernel, < stieltjes < * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... OK * DONE Status: 4 WARNINGs, 4 NOTEs