Package: intrinsicFRP
Check: tests
New result: ERROR
    Running ‘testthat.R’ [167s/168s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/tests.html
    > # * https://testthat.r-lib.org/reference/test_package.html#special-files
    > 
    > library(testthat)
    > library(intrinsicFRP)
    > 
    > test_check("intrinsicFRP")
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1138 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-identification_tests.R:80:3'): Test ChenFang2019BetaRankTest and
      IterativeKleibergenPaap2006BetaRankTest ──
    Expected `ChenFang2019BetaRankTest(returns, random_factors)` to run without any errors.
    i Actually got a <std::runtime_error> with text:
      solve(): solution not found
    
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 1138 ]
    Error: Test failures
    Execution halted

Package: sharp
Check: examples
New result: ERROR
  Running examples in ‘sharp-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: SelectionAlgo
  > ### Title: Variable selection algorithm
  > ### Aliases: SelectionAlgo
  > 
  > ### ** Examples
  > 
  > # Data simulation (univariate outcome)
  > set.seed(1)
  > simul <- SimulateRegression(pk = 50)
  > 
  > # Running the LASSO
  > mylasso <- SelectionAlgo(
  +   xdata = simul$xdata, ydata = simul$ydata,
  +   Lambda = c(0.1, 0.2), family = "gaussian",
  + )
  > 
  > # Data simulation (multivariate outcome)
  > set.seed(1)
  > simul <- SimulateRegression(pk = 50, q = 3)
  > 
  > # Running multivariate Gaussian LASSO
  > mylasso <- SelectionAlgo(
  +   xdata = simul$xdata, ydata = simul$ydata,
  +   Lambda = c(0.1, 0.2), family = "mgaussian"
  + )
  Error in `[<-`(`*tmp*`, rownames(tmpbeta), colnames(tmpbeta), y_id, value = tmpbeta) : 
    subscript out of bounds
  Calls: SelectionAlgo -> do.call -> <Anonymous>
  Execution halted

Package: transreg
Check: examples
New result: ERROR
  Running examples in ‘transreg-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: plot.transreg
  > ### Title: Plot transreg-object
  > ### Aliases: plot.transreg
  > 
  > ### ** Examples
  > 
  > #--- simulation ---
  > set.seed(1)
  > n <- 100; p <- 500
  > X <- matrix(rnorm(n=n*p),nrow=n,ncol=p)
  > beta <- rnorm(p) #*rbinom(n=n,size=1,prob=0.2)
  > prior1 <- beta + rnorm(p)
  > prior2 <- beta + rnorm(p)
  > prior3 <- rnorm(p)
  > prior4 <- rnorm(p)
  > y <- X %*% beta
  > 
  > prior <- cbind(prior1,prior2,prior3,prior4)
  > object <- transreg(y=y,X=X,prior=prior,alpha=0,stack=c("sta","sim"))
  > 
  > plot(object,stack="sta")
  Error in .subscript.2ary(x, i, j, drop = TRUE) : subscript out of bounds
  Calls: plot ... eval -> eval -> .coef.sta -> [ -> [ -> .subscript.2ary
  Execution halted

Package: transreg
Check: tests
New result: ERROR
    Running ‘testthat.R’ [25s/25s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(transreg)
    > 
    > testthat::test_check(package="transreg",stop_on_warning=FALSE)
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test.R:56:5'): (code run outside of `test_that()`) ──────────────────
    Error in `.subscript.2ary(x, i, j, drop = TRUE)`: subscript out of bounds
    Backtrace:
        ▆
     1. ├─stats::coef(object = object) at test.R:56:5
     2. └─transreg:::coef.transreg(object = object)
     3.   ├─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
     4.   │ └─base::eval(parse(text = paste0(".coef.", stack, "(object=object,...)")))
     5.   └─transreg:::.coef.sta(object = object, ...)
     6.     ├─beta["(Intercept)", "s0"]
     7.     └─beta["(Intercept)", "s0"]
     8.       └─Matrix:::.subscript.2ary(x, i, j, drop = TRUE)
    
    [ FAIL 1 | WARN 0 | SKIP 0 | PASS 3 ]
    Error: Test failures
    Execution halted