* installing *source* package ‘gkwreg’ ... ** this is package ‘gkwreg’ version ‘2.1.1’ ** using staged installation ** libs using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:5: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c gkwreg-predict-resid.cpp -o gkwreg-predict-resid.o clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o gkwreg.so RcppExports.o gkwreg-predict-resid.o -llapack -L/home/hornik/tmp/R-d-clang-21/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R-d-clang-21/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/gkwreg.Rcheck/00LOCK-gkwreg/00new/gkwreg/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_gkwbetareg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.cpp:17: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.cpp:17: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.cpp:206:16: warning: unused variable 'useMeanCache' [-Wunused-variable] 206 | DATA_INTEGER(useMeanCache); // Ignored - removed caching overhead | ^~~~~~~~~~~~ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.cpp:208:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 208 | DATA_INTEGER(userChunkSize); // Ignored - removed complexity | ^~~~~~~~~~~~~ 5 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwbetareg_compile_20251114040509/gkwbetareg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_bkwreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.cpp:13: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.cpp:13: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.cpp:314:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 314 | DATA_INTEGER(userChunkSize); // For compatibility | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/bkwreg_compile_20251114040541/bkwreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_ekwreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.cpp:20: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.cpp:20: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.cpp:318:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 318 | DATA_INTEGER(userChunkSize); | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/ekwreg_compile_20251114040614/ekwreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_gkwreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.cpp:29: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.cpp:29: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.cpp:345:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 345 | DATA_INTEGER(userChunkSize); // For compatibility | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/gkwreg_compile_20251114040646/gkwreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_kkwreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.cpp:17: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.cpp:17: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.cpp:315:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 315 | DATA_INTEGER(userChunkSize); // For compatibility | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kkwreg_compile_20251114040718/kkwreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_kwreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.cpp:20: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.cpp:20: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.cpp:290:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 290 | DATA_INTEGER(userChunkSize); // For compatibility | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/kwreg_compile_20251114040751/kwreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR Note: Using Makevars in /home/hornik/.R/Makevars-clang using C++ compiler: ‘Debian clang version 21.1.5 (1)’ clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_mcreg -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.cpp -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.o In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.cpp:19: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:26: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseCore:61: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.cpp:19: In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include/TMB.hpp:96: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/Sparse:29: In file included from /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/SparseLU:35: /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmp3S7ffc/RLIBS_366cea72cd7777/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.cpp:262:16: warning: unused variable 'userChunkSize' [-Wunused-variable] 262 | DATA_INTEGER(userChunkSize); // Restored (but not used in simple loop) | ^~~~~~~~~~~~~ 4 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.so /tmp/Rtmp4JjMXS/working_dir/Rtmpdgr28d/mcreg_compile_20251114040824/mcreg.o -L/home/hornik/tmp/R-d-clang-21/lib -lR ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gkwreg)