downloading reverse dependencies ... downloading archivist.github_0.2.6.tar.gz ... ok downloading atime_2024.10.5.tar.gz ... ok downloading cabinets_0.6.0.tar.gz ... ok downloading changer_0.0.5.tar.gz ... ok downloading cheatsheet_0.1.2.tar.gz ... ok downloading DramaAnalysis_3.0.2.tar.gz ... ok downloading fgitR_0.2.0.tar.gz ... ok downloading git2rdata_0.4.1.tar.gz ... ok downloading git4r_0.1.2.tar.gz ... ok downloading gitdown_0.1.6.tar.gz ... ok downloading kirby21.base_1.7.3.tar.gz ... ok downloading link2GI_0.6-1.tar.gz ... ok downloading minimapR_0.0.1.0.tar.gz ... ok downloading mlflow_2.16.2.tar.gz ... ok downloading rDataPipeline_0.60.0.tar.gz ... ok downloading RepoGenerator_0.0.1.tar.gz ... ok downloading ropenblas_0.3.0.tar.gz ... ok downloading Rpolyhedra_0.5.4.tar.gz ... ok downloading shiny.info_0.2.0.tar.gz ... ok downloading sketchy_1.0.4.tar.gz ... ok downloading workflowr_1.7.1.tar.gz ... ok downloading adaptalint_0.2.4.tar.gz ... ok downloading autonewsmd_0.0.9.tar.gz ... ok downloading cometr_0.4.0.tar.gz ... ok downloading drat_0.2.4.tar.gz ... ok downloading envDocument_2.4.1.tar.gz ... ok downloading gistr_0.9.0.tar.gz ... ok downloading groundhog_3.2.1.tar.gz ... ok downloading icesTAF_4.2.0.tar.gz ... ok downloading ixplorer_0.2.2.tar.gz ... ok downloading lvmisc_0.1.2.tar.gz ... ok downloading nat.templatebrains_1.1.tar.gz ... ok downloading precommit_0.4.3.tar.gz ... ok downloading Rcereal_1.3.2.tar.gz ... ok downloading remotes_2.5.0.tar.gz ... ok downloading sinew_0.4.0.tar.gz ... ok installing dependencies ‘archivist’, ‘available’, ‘binsegRcpp’, ‘carrier’, ‘codemetar’, ‘configr’, ‘cumstats’, ‘decor’, ‘details’, ‘diffr’, ‘forge’, ‘fpop’, ‘git2r’, ‘gitear’, ‘LOPART’, ‘nat’, ‘nc’, ‘pafr’, ‘PeakSegDisk’, ‘re2’, ‘rgrass’, ‘shiny.i18n’, ‘sos’, ‘TAF’, ‘wbs’, ‘xaringanExtra’ also installing the dependencies ‘codemeta’, ‘nat.utils’ begin installing package ‘codemeta’ begin installing package ‘archivist’ begin installing package ‘nat.utils’ begin installing package ‘re2’ begin installing package ‘binsegRcpp’ begin installing package ‘fpop’ begin installing package ‘wbs’ begin installing package ‘cumstats’ begin installing package ‘LOPART’ begin installing package ‘PeakSegDisk’ begin installing package ‘nc’ begin installing package ‘available’ begin installing package ‘rgrass’ begin installing package ‘diffr’ begin installing package ‘pafr’ begin installing package ‘forge’ begin installing package ‘carrier’ begin installing package ‘xaringanExtra’ begin installing package ‘configr’ begin installing package ‘TAF’ begin installing package ‘gitear’ begin installing package ‘shiny.i18n’ begin installing package ‘decor’ begin installing package ‘sos’ begin installing package ‘details’ begin installing package ‘git2r’ * installing *source* package ‘cumstats’ ... ** package ‘cumstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cumstats) * installing *source* package ‘nat.utils’ ... ** package ‘nat.utils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nat.utils) begin installing package ‘nat’ * installing *source* package ‘carrier’ ... ** package ‘carrier’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (carrier) * installing *source* package ‘diffr’ ... ** package ‘diffr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffr) * installing *source* package ‘codemeta’ ... ** package ‘codemeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemeta) begin installing package ‘codemetar’ * installing *source* package ‘forge’ ... ** package ‘forge’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forge) * installing *source* package ‘wbs’ ... ** package ‘wbs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHtlewK/R.INSTALL2ff6c27574b491/wbs/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wbs.c -o wbs.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wbs_init.c -o wbs_init.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o wbs.so wbs.o wbs_init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHtlewK/R.INSTALL2ff6c27574b491/wbs/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-wbs/00new/wbs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wbs) * installing *source* package ‘nc’ ... ** package ‘nc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nc) * installing *source* package ‘sos’ ... ** package ‘sos’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sos) * installing *source* package ‘xaringanExtra’ ... ** package ‘xaringanExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xaringanExtra) * installing *source* package ‘details’ ... ** package ‘details’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (details) * installing *source* package ‘available’ ... ** package ‘available’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (available) * installing *source* package ‘configr’ ... ** package ‘configr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (configr) * installing *source* package ‘TAF’ ... ** package ‘TAF’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TAF) * installing *source* package ‘shiny.i18n’ ... ** package ‘shiny.i18n’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.i18n) * installing *source* package ‘gitear’ ... ** package ‘gitear’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gitear) * installing *source* package ‘rgrass’ ... ** package ‘rgrass’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgrass) * installing *source* package ‘decor’ ... ** package ‘decor’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpB0TLg9/R.INSTALL2ff6f3603a566a/decor/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c blank_comments.cpp -o blank_comments.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c parse_cpp_function.cpp -o parse_cpp_function.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o decor.so blank_comments.o init.o parse_cpp_function.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpB0TLg9/R.INSTALL2ff6f3603a566a/decor/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-decor/00new/decor/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (decor) * installing *source* package ‘pafr’ ... ** package ‘pafr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pafr) * installing *source* package ‘PeakSegDisk’ ... ** package ‘PeakSegDisk’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTjtovO/R.INSTALL2ff6c35439c7d6/PeakSegDisk/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PeakSegFPOPLog.cpp -o PeakSegFPOPLog.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c funPieceListLog.cpp -o funPieceListLog.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o PeakSegDisk.so PeakSegFPOPLog.o funPieceListLog.o interface.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTjtovO/R.INSTALL2ff6c35439c7d6/PeakSegDisk/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-PeakSegDisk/00new/PeakSegDisk/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PeakSegDisk) * installing *source* package ‘codemetar’ ... ** package ‘codemetar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemetar) * installing *source* package ‘fpop’ ... ** package ‘fpop’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqBoxCX/R.INSTALL2ff6b21f38d6e8/fpop/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c BinSeg_MultiDim.cpp -o BinSeg_MultiDim.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Call_BinSeg_MultiDim.cpp -o Call_BinSeg_MultiDim.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Heap.cpp -o Heap.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Node.cpp -o Node.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Rwrappers.cc -o Rwrappers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c colibri.cc -o colibri.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c liste.cc -o liste.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o fpop.so BinSeg_MultiDim.o Call_BinSeg_MultiDim.o Heap.o Node.o Rwrappers.o colibri.o liste.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqBoxCX/R.INSTALL2ff6b21f38d6e8/fpop/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fpop/00new/fpop/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fpop) * installing *source* package ‘archivist’ ... ** package ‘archivist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (archivist) * installing *source* package ‘LOPART’ ... ** package ‘LOPART’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp23lRNH/R.INSTALL2ff6be1543ef9f/LOPART/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LOPART.cpp -o LOPART.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o LOPART.so LOPART.o RcppExports.o interface.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp23lRNH/R.INSTALL2ff6be1543ef9f/LOPART/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-LOPART/00new/LOPART/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (LOPART) * installing *source* package ‘git2r’ ... ** using staged installation checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes Found pkg-config cflags and libs! checking whether the libgit2 version will work in git2r... yes ----- Results of the git2r package configure ----- PKG_CFLAGS: PKG_LIBS: -lgit2 -------------------------------------------------- configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpX5QxDS/R.INSTALL2ff6fa59292ac7/git2r/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r.c -o git2r.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_S3.c -o git2r_S3.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_arg.c -o git2r_arg.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_blame.c -o git2r_blame.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_blob.c -o git2r_blob.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_branch.c -o git2r_branch.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_checkout.c -o git2r_checkout.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_clone.c -o git2r_clone.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_commit.c -o git2r_commit.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_config.c -o git2r_config.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_cred.c -o git2r_cred.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_diff.c -o git2r_diff.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_error.c -o git2r_error.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_graph.c -o git2r_graph.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_index.c -o git2r_index.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_libgit2.c -o git2r_libgit2.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_merge.c -o git2r_merge.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_note.c -o git2r_note.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_object.c -o git2r_object.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_odb.c -o git2r_odb.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_oid.c -o git2r_oid.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_push.c -o git2r_push.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_reference.c -o git2r_reference.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_reflog.c -o git2r_reflog.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_remote.c -o git2r_remote.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_repository.c -o git2r_repository.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_reset.c -o git2r_reset.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_revparse.c -o git2r_revparse.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_revwalk.c -o git2r_revwalk.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_signature.c -o git2r_signature.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_stash.c -o git2r_stash.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_status.c -o git2r_status.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_tag.c -o git2r_tag.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_transfer.c -o git2r_transfer.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c git2r_tree.c -o git2r_tree.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpX5QxDS/R.INSTALL2ff6fa59292ac7/git2r/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-git2r/00new/git2r/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (git2r) * installing *source* package ‘nat’ ... ** package ‘nat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nat) * installing *source* package ‘binsegRcpp’ ... ** package ‘binsegRcpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBQJMkU/R.INSTALL2ff6a63c65d74d/binsegRcpp/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PiecewiseFunction.cpp -o PiecewiseFunction.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c binseg.cpp -o binseg.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cum_median.cpp -o cum_median.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c depth_first.cpp -o depth_first.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interface.cpp -o interface.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o binsegRcpp.so PiecewiseFunction.o RcppExports.o binseg.o cum_median.o depth_first.o interface.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBQJMkU/R.INSTALL2ff6a63c65d74d/binsegRcpp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-binsegRcpp/00new/binsegRcpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (binsegRcpp) * installing *source* package ‘re2’ ... ** package ‘re2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4cu7ke/R.INSTALL2ff6a9702af016/re2/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/util/rune.cc -o re2google/util/rune.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/util/strutil.cc -o re2google/util/strutil.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/bitstate.cc -o re2google/re2/bitstate.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/compile.cc -o re2google/re2/compile.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/dfa.cc -o re2google/re2/dfa.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/filtered_re2.cc -o re2google/re2/filtered_re2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/mimics_pcre.cc -o re2google/re2/mimics_pcre.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/nfa.cc -o re2google/re2/nfa.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/onepass.cc -o re2google/re2/onepass.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/parse.cc -o re2google/re2/parse.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/perl_groups.cc -o re2google/re2/perl_groups.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prefilter.cc -o re2google/re2/prefilter.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prefilter_tree.cc -o re2google/re2/prefilter_tree.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/prog.cc -o re2google/re2/prog.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/re2.cc -o re2google/re2/re2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/regexp.cc -o re2google/re2/regexp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/set.cc -o re2google/re2/set.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/simplify.cc -o re2google/re2/simplify.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/stringpiece.cc -o re2google/re2/stringpiece.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/tostring.cc -o re2google/re2/tostring.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/unicode_casefold.cc -o re2google/re2/unicode_casefold.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2google/re2/unicode_groups.cc -o re2google/re2/unicode_groups.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_re2proxy.cpp -o re2_re2proxy.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_regexp.cpp -o re2_regexp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_do_match.cpp -o re2_do_match.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_locate.cpp -o re2_locate.o re2_locate.cpp: In member function ‘virtual void {anonymous}::DoLocateAll::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_locate.cpp:74:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 74 | for (int row = 0; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_get_options.cpp -o re2_get_options.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_match.cpp -o re2_match.o re2_match.cpp: In member function ‘virtual void {anonymous}::DoMatchAll::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_match.cpp:143:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 143 | for (int row = 0; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_detect.cpp -o re2_detect.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_match_cpp.cpp -o re2_match_cpp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_split.cpp -o re2_split.o re2_split.cpp: In member function ‘virtual void {anonymous}::DoSplit::match_found(int, re2::StringPiece&, re2::RE2Proxy::Adapter&, const re2::AllMatches&)’: re2_split.cpp:36:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 36 | for (; row < all_matches.size(); row++) { | ~~~~^~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_extract_replace.cpp -o re2_extract_replace.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_replace.cpp -o re2_replace.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_quote_meta.cpp -o re2_quote_meta.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_max_submatch.cpp -o re2_max_submatch.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_capturing_group.cpp -o re2_capturing_group.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ire2google -DNDEBUG -include re2/re2.h -DRE2_R_BUILD -pthread -DRE2_ON_VALGRIND -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c re2_random_text.cpp -o re2_random_text.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o re2.so re2google/util/rune.o re2google/util/strutil.o re2google/re2/bitstate.o re2google/re2/compile.o re2google/re2/dfa.o re2google/re2/filtered_re2.o re2google/re2/mimics_pcre.o re2google/re2/nfa.o re2google/re2/onepass.o re2google/re2/parse.o re2google/re2/perl_groups.o re2google/re2/prefilter.o re2google/re2/prefilter_tree.o re2google/re2/prog.o re2google/re2/re2.o re2google/re2/regexp.o re2google/re2/set.o re2google/re2/simplify.o re2google/re2/stringpiece.o re2google/re2/tostring.o re2google/re2/unicode_casefold.o re2google/re2/unicode_groups.o RcppExports.o re2_re2proxy.o re2_regexp.o re2_do_match.o re2_locate.o re2_get_options.o re2_match.o re2_detect.o re2_match_cpp.o re2_split.o re2_extract_replace.o re2_replace.o re2_quote_meta.o re2_max_submatch.o re2_capturing_group.o re2_random_text.o -pthread -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4cu7ke/R.INSTALL2ff6a9702af016/re2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-re2/00new/re2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (re2) checking git2r_0.35.0.tar.gz ... checking archivist.github_0.2.6.tar.gz ... checking atime_2024.10.5.tar.gz ... checking cabinets_0.6.0.tar.gz ... checking changer_0.0.5.tar.gz ... checking cheatsheet_0.1.2.tar.gz ... checking DramaAnalysis_3.0.2.tar.gz ... checking fgitR_0.2.0.tar.gz ... checking git2rdata_0.4.1.tar.gz ... checking git4r_0.1.2.tar.gz ... checking gitdown_0.1.6.tar.gz ... checking kirby21.base_1.7.3.tar.gz ... checking link2GI_0.6-1.tar.gz ... checking minimapR_0.0.1.0.tar.gz ... checking mlflow_2.16.2.tar.gz ... checking rDataPipeline_0.60.0.tar.gz ... checking RepoGenerator_0.0.1.tar.gz ... checking ropenblas_0.3.0.tar.gz ... checking Rpolyhedra_0.5.4.tar.gz ... checking shiny.info_0.2.0.tar.gz ... checking sketchy_1.0.4.tar.gz ... checking workflowr_1.7.1.tar.gz ... checking adaptalint_0.2.4.tar.gz ... checking autonewsmd_0.0.9.tar.gz ... checking cometr_0.4.0.tar.gz ... checking drat_0.2.4.tar.gz ... checking envDocument_2.4.1.tar.gz ... checking gistr_0.9.0.tar.gz ... checking nat.templatebrains_1.1.tar.gz ... checking remotes_2.5.0.tar.gz ... checking precommit_0.4.3.tar.gz ... checking lvmisc_0.1.2.tar.gz ... checking icesTAF_4.2.0.tar.gz ... checking Rcereal_1.3.2.tar.gz ... checking sinew_0.4.0.tar.gz ... checking groundhog_3.2.1.tar.gz ... checking ixplorer_0.2.2.tar.gz ... Depends: Package: git2r Depends: R (>= 4.0) Imports: graphics, utils Timings: user system elapsed git2r 53.897 8.514 76.355 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 6 30 Check results summary: git2r ... OK rdepends_adaptalint ... OK rdepends_archivist.github ... NOTE * checking Rd cross-references ... NOTE rdepends_atime ... OK rdepends_autonewsmd ... OK rdepends_cabinets ... OK rdepends_changer ... OK rdepends_cheatsheet ... OK rdepends_cometr ... OK rdepends_DramaAnalysis ... OK rdepends_drat ... OK rdepends_envDocument ... OK rdepends_fgitR ... OK rdepends_gistr ... OK rdepends_git2rdata ... OK rdepends_git4r ... OK rdepends_gitdown ... OK rdepends_groundhog ... OK rdepends_icesTAF ... NOTE * checking Rd cross-references ... NOTE rdepends_ixplorer ... OK rdepends_kirby21.base ... OK rdepends_link2GI ... NOTE * checking Rd cross-references ... NOTE rdepends_lvmisc ... OK rdepends_minimapR ... OK rdepends_mlflow ... OK rdepends_nat.templatebrains ... NOTE * checking Rd cross-references ... NOTE rdepends_precommit ... OK rdepends_Rcereal ... OK rdepends_rDataPipeline ... OK rdepends_remotes ... OK rdepends_RepoGenerator ... OK rdepends_ropenblas ... OK rdepends_Rpolyhedra ... OK rdepends_shiny.info ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_sinew ... OK rdepends_sketchy ... OK rdepends_workflowr ... NOTE * checking Rd cross-references ... NOTE Check results changes: Package: archivist.github Check: package dependencies Old result: ERROR New result: OK Package: archivist.github Check: Rd cross-references New result: NOTE Package: atime Check: package dependencies Old result: ERROR New result: OK Package: cabinets Check: package dependencies Old result: ERROR New result: OK Package: changer Check: package dependencies Old result: ERROR New result: OK Package: cheatsheet Check: package dependencies Old result: ERROR New result: OK Package: DramaAnalysis Check: package dependencies Old result: ERROR New result: OK Package: drat Check: tests Old result: ERROR New result: OK Package: fgitR Check: package dependencies Old result: ERROR New result: OK Package: git2rdata Check: package dependencies Old result: ERROR New result: OK Package: git4r Check: package dependencies Old result: ERROR New result: OK Package: gitdown Check: package dependencies Old result: ERROR New result: OK Package: kirby21.base Check: package dependencies Old result: ERROR New result: OK Package: link2GI Check: package dependencies Old result: ERROR New result: OK Package: link2GI Check: Rd cross-references New result: NOTE Package: lvmisc Check: tests Old result: ERROR New result: OK Package: minimapR Check: package dependencies Old result: ERROR New result: OK Package: mlflow Check: package dependencies Old result: ERROR New result: OK Package: precommit Check: tests Old result: ERROR New result: OK Package: rDataPipeline Check: package dependencies Old result: ERROR New result: OK Package: RepoGenerator Check: package dependencies Old result: ERROR New result: OK Package: ropenblas Check: package dependencies Old result: ERROR New result: OK Package: Rpolyhedra Check: package dependencies Old result: ERROR New result: OK Package: shiny.info Check: package dependencies Old result: ERROR New result: OK Package: shiny.info Check: Rd files New result: NOTE Package: sketchy Check: package dependencies Old result: ERROR New result: OK Package: workflowr Check: package dependencies Old result: ERROR New result: OK Package: workflowr Check: Rd cross-references New result: NOTE