test_that("HTML file is created and content is correct", { testthat::skip_on_cran() gimap_dataset <- get_example_data("gimap") html_file <- run_qc(gimap_dataset, open_results = FALSE, overwrite = TRUE) expect_true(file.exists(html_file)) qc_cdf(gimap_dataset) qc_sample_hist(gimap_dataset) qc_variance_hist(gimap_dataset) qc_constructs_countzero_bar(gimap_dataset) qc_cor_heatmap(gimap_dataset) qc_plasmid_histogram(gimap_dataset) gimap_dataset <- get_example_data("gimap_treatment") html_file <- run_qc(gimap_dataset, open_results = FALSE, overwrite = TRUE) expect_true(file.exists(html_file)) })