* using log directory 'd:/RCompile/CRANincoming/R-devel/ggtaxplot.Rcheck'
* using R Under development (unstable) (2024-12-15 r87442 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'ggtaxplot/DESCRIPTION' ... OK
* this is package 'ggtaxplot' version '0.0.0.9000'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Clement Coclet <clement.coclet@gmail.com>'

New submission

Version contains large components (0.0.0.9000)

Non-FOSS package license (`use_gpl3_license()`)

Possibly misspelled words in DESCRIPTION:
  ggtaxplot (7:14)

The Title field should be in title case. Current version is:
  'Create a plot to visualize taxonomy of the dataset'
In title case that is:
  'Create a Plot to Visualize Taxonomy of the Dataset'

The Description field should not start with the package name,
  'This package' or similar.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'ggtaxplot' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... WARNING
Non-standard license specification:
  `use_gpl3_license()`
Standardizable: FALSE
Author field differs from that derived from Authors@R
  Author:    'Clement Coclet [aut, cre] (https://gitlab.com/ccoclet/)'
  Authors@R: 'Clement Coclet [aut, cre] (GITLAB: https://gitlab.com/ccoclet/)'

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
ggtaxplot: no visible global function definition for '%>%'
ggtaxplot: no visible global function definition for 'mutate'
ggtaxplot: no visible global function definition for ':='
ggtaxplot: no visible global function definition for 'sym'
ggtaxplot: no visible global function definition for 'separate'
ggtaxplot: no visible binding for global variable 'Phylum'
ggtaxplot: no visible binding for global variable 'Class'
ggtaxplot: no visible binding for global variable 'Order'
ggtaxplot: no visible binding for global variable 'Family'
ggtaxplot: no visible binding for global variable 'Genus'
ggtaxplot: no visible global function definition for 'select'
ggtaxplot: no visible binding for global variable 'Domain'
ggtaxplot: no visible global function definition for 'pivot_longer'
ggtaxplot: no visible binding for global variable 'Value'
ggtaxplot: no visible binding for global variable 'Rank'
ggtaxplot: no visible global function definition for 'group_by'
ggtaxplot: no visible global function definition for 'summarise'
ggtaxplot: no visible global function definition for 'n'
ggtaxplot: no visible binding for global variable 'Count'
ggtaxplot: no visible global function definition for 'left_join'
ggtaxplot: no visible binding for global variable 'Percentage'
ggtaxplot: no visible global function definition for 'distinct'
ggtaxplot: no visible global function definition for 'arrange'
ggtaxplot: no visible global function definition for 'filter'
ggtaxplot: no visible binding for global variable 'Color'
ggtaxplot: no visible global function definition for 'pull'
ggtaxplot: no visible global function definition for 'setNames'
ggtaxplot: no visible global function definition for 'ggplot'
ggtaxplot: no visible global function definition for 'aes'
ggtaxplot: no visible global function definition for 'labs'
ggtaxplot: no visible global function definition for 'theme_classic'
ggtaxplot: no visible global function definition for
  'scale_fill_manual'
ggtaxplot: no visible global function definition for
  'scale_y_continuous'
ggtaxplot: no visible global function definition for 'percent_format'
ggtaxplot: no visible global function definition for 'geom_flow'
ggtaxplot: no visible global function definition for 'geom_stratum'
ggtaxplot: no visible global function definition for 'theme'
ggtaxplot: no visible global function definition for 'element_text'
ggtaxplot: no visible global function definition for 'element_blank'
lighten_color: no visible global function definition for 'col2rgb'
lighten_color: no visible global function definition for 'rgb'
Undefined global functions or variables:
  %>% := Class Color Count Domain Family Genus Order Percentage Phylum
  Rank Value aes arrange col2rgb distinct element_blank element_text
  filter geom_flow geom_stratum ggplot group_by labs left_join mutate n
  percent_format pivot_longer pull rgb scale_fill_manual
  scale_y_continuous select separate setNames summarise sym theme
  theme_classic
Consider adding
  importFrom("grDevices", "col2rgb", "rgb")
  importFrom("stats", "filter", "setNames")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* checking for code which exercises the package ... WARNING
No examples, no tests, no vignettes
* DONE
Status: 2 WARNINGs, 2 NOTEs