test_that("brain_atlas works", { k <- brain_atlas("test", "cortical", dk$data) expect_equal(class(k), "brain_atlas") expect_error(brain_atlas("test", "csortical", dk$data)) expect_error(brain_atlas(c("test", "test"), "cortical", dk$data)) pal <- dk$palette k <- brain_atlas("test", "cortical", dk$data, pal) expect_equal(class(k), "brain_atlas") expect_error(brain_atlas("test", "cortical", dk$data, pal[-1])) names(pal)[1] <- "bla" expect_error(brain_atlas("test", "cortical", dk$data, pal)) }) test_that("brain-atlas format", { k <- capture.output(dk) expect_equal(k[1], "# dk cortical brain atlas") expect_equal(k[2], " regions: 35 ") }) test_that("as_brain-atlas", { expect_error(as_brain_atlas(~age), "Cannot make object") expect_error(as_brain_atlas(data.frame()), "Cannot make object") ka <- data.frame(atlas = NA, type = "cortical", hemi = NA, region = NA, side = NA, label = NA) expect_error(as_brain_atlas(ka), "Object does not contain") ks <- as.data.frame(dk) ka <- as_brain_atlas(ks) expect_equal(class(ka), "brain_atlas") expect_true(is_brain_atlas(ka)) ka <- as_brain_atlas(ks) expect_equal(class(ka), "brain_atlas") expect_true(is_brain_atlas(ka)) ka <- as_ggseg_atlas(dk) ks <- as_brain_atlas(ka) expect_equal(class(ks), "brain_atlas") expect_true(is_brain_atlas(ks)) expect_error(as_brain_atlas(list()), "Cannot make object") expect_equal(class(as_brain_atlas(dk)), "brain_atlas") ka <- as.list(dk) expect_equal(class(as_brain_atlas(ka)), "brain_atlas") expect_true(inherits(brain_data(dk$data), "brain_data")) expect_true(inherits(as_brain_data(dk$data), "brain_data")) }) test_that("brain-atlas changes", { expect_equal(class(as.data.frame(dk)), "data.frame") expect_equal(class(as.list(dk)), "list") expect_true(inherits(as_ggseg_atlas(dk), "ggseg_atlas")) k <- dk k$type <- NA k <- as.list(k) expect_equal(class(k), "list") expect_true(inherits(as_brain_atlas(k), "brain_atlas")) })